RNA–Protein interactions for RNA: ENST00000566775.1

UBE2I-214, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

TSL 3

Gene UBE2I, Length 396 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-214ENST00000566775 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
UBE2I-214ENST00000566775 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
UBE2I-214ENST00000566775 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
UBE2I-214ENST00000566775 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
UBE2I-214ENST00000566775 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
UBE2I-214ENST00000566775 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
UBE2I-214ENST00000566775 FOXD1Q16676 465 aa21.14■□□□□ 0.97
UBE2I-214ENST00000566775 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
UBE2I-214ENST00000566775 ADRA2BP18089 450 aa20.45■□□□□ 0.86
UBE2I-214ENST00000566775 PIAS4Q8N2W9 510 aaPredicted RBP19.93■□□□□ 0.78
UBE2I-214ENST00000566775 ABCC9O60706 1549 aa19.83■□□□□ 0.77
UBE2I-214ENST00000566775 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
UBE2I-214ENST00000566775 MSH5O43196 834 aa19.37■□□□□ 0.69
UBE2I-214ENST00000566775 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
UBE2I-214ENST00000566775 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
UBE2I-214ENST00000566775 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
UBE2I-214ENST00000566775 KCNA4P22459 653 aa18.72■□□□□ 0.59
UBE2I-214ENST00000566775 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
UBE2I-214ENST00000566775 NACADO15069 1562 aa18.63■□□□□ 0.57
UBE2I-214ENST00000566775 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
UBE2I-214ENST00000566775 UNC13AQ9UPW8 1703 aa18.5■□□□□ 0.55
UBE2I-214ENST00000566775 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
UBE2I-214ENST00000566775 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
UBE2I-214ENST00000566775 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
UBE2I-214ENST00000566775 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
UBE2I-214ENST00000566775 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
UBE2I-214ENST00000566775 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
UBE2I-214ENST00000566775 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
UBE2I-214ENST00000566775 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
UBE2I-214ENST00000566775 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
UBE2I-214ENST00000566775 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
UBE2I-214ENST00000566775 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
UBE2I-214ENST00000566775 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
UBE2I-214ENST00000566775 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
UBE2I-214ENST00000566775 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
UBE2I-214ENST00000566775 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
UBE2I-214ENST00000566775 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
UBE2I-214ENST00000566775 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
UBE2I-214ENST00000566775 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
UBE2I-214ENST00000566775 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
UBE2I-214ENST00000566775 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
UBE2I-214ENST00000566775 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
UBE2I-214ENST00000566775 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
UBE2I-214ENST00000566775 CUX2O14529 1486 aa17.28■□□□□ 0.36
UBE2I-214ENST00000566775 ZBTB22O15209 634 aa17.26■□□□□ 0.35
UBE2I-214ENST00000566775 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
UBE2I-214ENST00000566775 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
UBE2I-214ENST00000566775 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
UBE2I-214ENST00000566775 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
UBE2I-214ENST00000566775 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
UBE2I-214ENST00000566775 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
UBE2I-214ENST00000566775 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
UBE2I-214ENST00000566775 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
UBE2I-214ENST00000566775 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
UBE2I-214ENST00000566775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■□□□□ 8.5
UBE2I-214ENST00000566775 THOC2Q8NI27 1593 aaKnown RBP16.97■□□□□ 0.31
UBE2I-214ENST00000566775 NESP48681 1621 aa16.96■□□□□ 0.3
UBE2I-214ENST00000566775 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
UBE2I-214ENST00000566775 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
UBE2I-214ENST00000566775 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
UBE2I-214ENST00000566775 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
UBE2I-214ENST00000566775 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
UBE2I-214ENST00000566775 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
UBE2I-214ENST00000566775 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
UBE2I-214ENST00000566775 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
UBE2I-214ENST00000566775 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
UBE2I-214ENST00000566775 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
UBE2I-214ENST00000566775 WDR62O43379 1518 aa16.63■□□□□ 0.25
UBE2I-214ENST00000566775 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
UBE2I-214ENST00000566775 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
UBE2I-214ENST00000566775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
UBE2I-214ENST00000566775 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
UBE2I-214ENST00000566775 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
UBE2I-214ENST00000566775 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
UBE2I-214ENST00000566775 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
UBE2I-214ENST00000566775 WIZO95785 1651 aa16.52■□□□□ 0.23
UBE2I-214ENST00000566775 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
UBE2I-214ENST00000566775 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
UBE2I-214ENST00000566775 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
UBE2I-214ENST00000566775 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
UBE2I-214ENST00000566775 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
UBE2I-214ENST00000566775 CFTRP13569 1480 aa16.36■□□□□ 0.21
UBE2I-214ENST00000566775 APLP2Q06481 763 aa16.34■□□□□ 0.21
UBE2I-214ENST00000566775 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
UBE2I-214ENST00000566775 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
UBE2I-214ENST00000566775 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
UBE2I-214ENST00000566775 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
UBE2I-214ENST00000566775 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
UBE2I-214ENST00000566775 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
UBE2I-214ENST00000566775 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
UBE2I-214ENST00000566775 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
UBE2I-214ENST00000566775 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
UBE2I-214ENST00000566775 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
UBE2I-214ENST00000566775 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
UBE2I-214ENST00000566775 CAPN15O75808 1086 aa16.15■□□□□ 0.18
UBE2I-214ENST00000566775 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
UBE2I-214ENST00000566775 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
UBE2I-214ENST00000566775 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
UBE2I-214ENST00000566775 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
UBE2I-214ENST00000566775 CHD1O14646 1710 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms