RNA–Protein interactions for RNA: ENST00000568363.5

SNHG20-205, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 786 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-205ENST00000568363 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
SNHG20-205ENST00000568363 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
SNHG20-205ENST00000568363 ABCC9O60706 1549 aa28.07■■■□□ 2.08
SNHG20-205ENST00000568363 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
SNHG20-205ENST00000568363 NACADO15069 1562 aa26.92■■□□□ 1.9
SNHG20-205ENST00000568363 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
SNHG20-205ENST00000568363 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
SNHG20-205ENST00000568363 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
SNHG20-205ENST00000568363 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
SNHG20-205ENST00000568363 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
SNHG20-205ENST00000568363 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
SNHG20-205ENST00000568363 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
SNHG20-205ENST00000568363 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
SNHG20-205ENST00000568363 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
SNHG20-205ENST00000568363 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
SNHG20-205ENST00000568363 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
SNHG20-205ENST00000568363 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
SNHG20-205ENST00000568363 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
SNHG20-205ENST00000568363 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
SNHG20-205ENST00000568363 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
SNHG20-205ENST00000568363 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
SNHG20-205ENST00000568363 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
SNHG20-205ENST00000568363 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
SNHG20-205ENST00000568363 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SNHG20-205ENST00000568363 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
SNHG20-205ENST00000568363 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
SNHG20-205ENST00000568363 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
SNHG20-205ENST00000568363 WIZO95785 1651 aa24.36■■□□□ 1.49
SNHG20-205ENST00000568363 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
SNHG20-205ENST00000568363 ERCC6Q03468 1493 aa24.25■■□□□ 1.47
SNHG20-205ENST00000568363 NESP48681 1621 aa24.21■■□□□ 1.47
SNHG20-205ENST00000568363 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.47
SNHG20-205ENST00000568363 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
SNHG20-205ENST00000568363 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
SNHG20-205ENST00000568363 CUX2O14529 1486 aa24.07■■□□□ 1.44
SNHG20-205ENST00000568363 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
SNHG20-205ENST00000568363 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
SNHG20-205ENST00000568363 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
SNHG20-205ENST00000568363 CFTRP13569 1480 aa23.9■■□□□ 1.42
SNHG20-205ENST00000568363 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
SNHG20-205ENST00000568363 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
SNHG20-205ENST00000568363 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
SNHG20-205ENST00000568363 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
SNHG20-205ENST00000568363 WDR62O43379 1518 aa23.72■■□□□ 1.39
SNHG20-205ENST00000568363 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
SNHG20-205ENST00000568363 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
SNHG20-205ENST00000568363 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
SNHG20-205ENST00000568363 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
SNHG20-205ENST00000568363 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
SNHG20-205ENST00000568363 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
SNHG20-205ENST00000568363 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
SNHG20-205ENST00000568363 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
SNHG20-205ENST00000568363 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
SNHG20-205ENST00000568363 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
SNHG20-205ENST00000568363 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
SNHG20-205ENST00000568363 CUX1P39880 1505 aa23.13■■□□□ 1.29
SNHG20-205ENST00000568363 SOGA1O94964 1423 aa23.1■■□□□ 1.29
SNHG20-205ENST00000568363 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
SNHG20-205ENST00000568363 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
SNHG20-205ENST00000568363 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
SNHG20-205ENST00000568363 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
SNHG20-205ENST00000568363 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.283e-10■■□□□ 14.3
SNHG20-205ENST00000568363 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
SNHG20-205ENST00000568363 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
SNHG20-205ENST00000568363 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
SNHG20-205ENST00000568363 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
SNHG20-205ENST00000568363 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
SNHG20-205ENST00000568363 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
SNHG20-205ENST00000568363 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
SNHG20-205ENST00000568363 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
SNHG20-205ENST00000568363 GAPVD1Q14C86 1478 aa22.83■■□□□ 1.25
SNHG20-205ENST00000568363 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
SNHG20-205ENST00000568363 CHD1O14646 1710 aa22.82■■□□□ 1.24
SNHG20-205ENST00000568363 SNAPC4Q5SXM2 1469 aa22.81■■□□□ 1.24
SNHG20-205ENST00000568363 FBLN2P98095 1184 aa22.81■■□□□ 1.24
SNHG20-205ENST00000568363 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
SNHG20-205ENST00000568363 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
SNHG20-205ENST00000568363 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
SNHG20-205ENST00000568363 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
SNHG20-205ENST00000568363 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.22
SNHG20-205ENST00000568363 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.22
SNHG20-205ENST00000568363 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.22
SNHG20-205ENST00000568363 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
SNHG20-205ENST00000568363 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
SNHG20-205ENST00000568363 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
SNHG20-205ENST00000568363 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
SNHG20-205ENST00000568363 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
SNHG20-205ENST00000568363 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
SNHG20-205ENST00000568363 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
SNHG20-205ENST00000568363 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
SNHG20-205ENST00000568363 NUP160Q12769 1436 aa22.46■■□□□ 1.19
SNHG20-205ENST00000568363 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
SNHG20-205ENST00000568363 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
SNHG20-205ENST00000568363 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
SNHG20-205ENST00000568363 IGF1RP08069 1367 aa22.4■■□□□ 1.18
SNHG20-205ENST00000568363 CUL7Q14999 1698 aa22.38■■□□□ 1.17
SNHG20-205ENST00000568363 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
SNHG20-205ENST00000568363 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
SNHG20-205ENST00000568363 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
SNHG20-205ENST00000568363 JPH4Q96JJ6 628 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms