RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.86
CTNND1-209ENST00000524579 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
CTNND1-209ENST00000524579 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
CTNND1-209ENST00000524579 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
CTNND1-209ENST00000524579 FOXD1Q16676 465 aa20.99■□□□□ 0.95
CTNND1-209ENST00000524579 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
CTNND1-209ENST00000524579 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
CTNND1-209ENST00000524579 ADRA2BP18089 450 aa20.17■□□□□ 0.82
CTNND1-209ENST00000524579 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
CTNND1-209ENST00000524579 MSH5O43196 834 aa19.31■□□□□ 0.68
CTNND1-209ENST00000524579 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
CTNND1-209ENST00000524579 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
CTNND1-209ENST00000524579 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
CTNND1-209ENST00000524579 KCNA4P22459 653 aa18.06■□□□□ 0.48
CTNND1-209ENST00000524579 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
CTNND1-209ENST00000524579 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
CTNND1-209ENST00000524579 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
CTNND1-209ENST00000524579 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
CTNND1-209ENST00000524579 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
CTNND1-209ENST00000524579 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
CTNND1-209ENST00000524579 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
CTNND1-209ENST00000524579 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
CTNND1-209ENST00000524579 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
CTNND1-209ENST00000524579 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CTNND1-209ENST00000524579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.288e-6■■■□□ 19
CTNND1-209ENST00000524579 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CTNND1-209ENST00000524579 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
CTNND1-209ENST00000524579 ZBTB22O15209 634 aa16.62■□□□□ 0.25
CTNND1-209ENST00000524579 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
CTNND1-209ENST00000524579 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
CTNND1-209ENST00000524579 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
CTNND1-209ENST00000524579 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
CTNND1-209ENST00000524579 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
CTNND1-209ENST00000524579 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
CTNND1-209ENST00000524579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
CTNND1-209ENST00000524579 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
CTNND1-209ENST00000524579 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
CTNND1-209ENST00000524579 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
CTNND1-209ENST00000524579 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
CTNND1-209ENST00000524579 APLP2Q06481 763 aa16.05■□□□□ 0.16
CTNND1-209ENST00000524579 CAPN15O75808 1086 aa16.04■□□□□ 0.16
CTNND1-209ENST00000524579 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
CTNND1-209ENST00000524579 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
CTNND1-209ENST00000524579 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
CTNND1-209ENST00000524579 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
CTNND1-209ENST00000524579 DSG3P32926 999 aa15.77■□□□□ 0.12
CTNND1-209ENST00000524579 ABCB7O75027 752 aa15.75■□□□□ 0.11
CTNND1-209ENST00000524579 POLA2Q14181 598 aa15.68■□□□□ 0.1
CTNND1-209ENST00000524579 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
CTNND1-209ENST00000524579 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
CTNND1-209ENST00000524579 FBLN2P98095 1184 aa15.28■□□□□ 0.04
CTNND1-209ENST00000524579 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
CTNND1-209ENST00000524579 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
CTNND1-209ENST00000524579 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
CTNND1-209ENST00000524579 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
CTNND1-209ENST00000524579 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
CTNND1-209ENST00000524579 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
CTNND1-209ENST00000524579 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
CTNND1-209ENST00000524579 FKBP8Q14318 412 aa14.89□□□□□ -0.03
CTNND1-209ENST00000524579 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
CTNND1-209ENST00000524579 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
CTNND1-209ENST00000524579 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTNND1-209ENST00000524579 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
CTNND1-209ENST00000524579 PROM2Q8N271 834 aa14.61□□□□□ -0.07
CTNND1-209ENST00000524579 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
CTNND1-209ENST00000524579 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
CTNND1-209ENST00000524579 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
CTNND1-209ENST00000524579 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
CTNND1-209ENST00000524579 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
CTNND1-209ENST00000524579 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
CTNND1-209ENST00000524579 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
CTNND1-209ENST00000524579 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
CTNND1-209ENST00000524579 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
CTNND1-209ENST00000524579 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
CTNND1-209ENST00000524579 MIER1Q8N108 512 aa14.17□□□□□ -0.14
CTNND1-209ENST00000524579 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
CTNND1-209ENST00000524579 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
CTNND1-209ENST00000524579 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
CTNND1-209ENST00000524579 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
CTNND1-209ENST00000524579 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
CTNND1-209ENST00000524579 POTEHQ6S545 545 aa14.04□□□□□ -0.16
CTNND1-209ENST00000524579 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
CTNND1-209ENST00000524579 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
CTNND1-209ENST00000524579 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
CTNND1-209ENST00000524579 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
CTNND1-209ENST00000524579 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
CTNND1-209ENST00000524579 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
CTNND1-209ENST00000524579 HAX1O00165 279 aa13.82□□□□□ -0.2
CTNND1-209ENST00000524579 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
CTNND1-209ENST00000524579 NUBP1P53384 320 aa13.79□□□□□ -0.2
CTNND1-209ENST00000524579 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
CTNND1-209ENST00000524579 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
CTNND1-209ENST00000524579 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
CTNND1-209ENST00000524579 EVX2Q03828 476 aa13.73□□□□□ -0.21
CTNND1-209ENST00000524579 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
CTNND1-209ENST00000524579 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
CTNND1-209ENST00000524579 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
CTNND1-209ENST00000524579 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
CTNND1-209ENST00000524579 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
CTNND1-209ENST00000524579 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms