RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
SNHG20-203ENST00000565256 ABCC9O60706 1549 aa27.58■■■□□ 2.01
SNHG20-203ENST00000565256 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.91
SNHG20-203ENST00000565256 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
SNHG20-203ENST00000565256 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
SNHG20-203ENST00000565256 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
SNHG20-203ENST00000565256 NACADO15069 1562 aa25.66■■□□□ 1.7
SNHG20-203ENST00000565256 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
SNHG20-203ENST00000565256 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
SNHG20-203ENST00000565256 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
SNHG20-203ENST00000565256 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
SNHG20-203ENST00000565256 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
SNHG20-203ENST00000565256 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
SNHG20-203ENST00000565256 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.58
SNHG20-203ENST00000565256 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
SNHG20-203ENST00000565256 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
SNHG20-203ENST00000565256 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
SNHG20-203ENST00000565256 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
SNHG20-203ENST00000565256 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
SNHG20-203ENST00000565256 CUX2O14529 1486 aa23.97■■□□□ 1.43
SNHG20-203ENST00000565256 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
SNHG20-203ENST00000565256 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
SNHG20-203ENST00000565256 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
SNHG20-203ENST00000565256 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
SNHG20-203ENST00000565256 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
SNHG20-203ENST00000565256 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
SNHG20-203ENST00000565256 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
SNHG20-203ENST00000565256 ATAD2BQ9ULI0 1458 aa23.6■■□□□ 1.37
SNHG20-203ENST00000565256 NESP48681 1621 aa23.58■■□□□ 1.36
SNHG20-203ENST00000565256 WIZO95785 1651 aa23.56■■□□□ 1.36
SNHG20-203ENST00000565256 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
SNHG20-203ENST00000565256 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
SNHG20-203ENST00000565256 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
SNHG20-203ENST00000565256 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
SNHG20-203ENST00000565256 TOP2AP11388 1531 aaKnown RBP23.3■■□□□ 1.32
SNHG20-203ENST00000565256 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
SNHG20-203ENST00000565256 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
SNHG20-203ENST00000565256 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
SNHG20-203ENST00000565256 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
SNHG20-203ENST00000565256 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
SNHG20-203ENST00000565256 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
SNHG20-203ENST00000565256 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
SNHG20-203ENST00000565256 WDR62O43379 1518 aa22.98■■□□□ 1.27
SNHG20-203ENST00000565256 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
SNHG20-203ENST00000565256 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
SNHG20-203ENST00000565256 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
SNHG20-203ENST00000565256 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
SNHG20-203ENST00000565256 CFTRP13569 1480 aa22.65■■□□□ 1.22
SNHG20-203ENST00000565256 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
SNHG20-203ENST00000565256 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
SNHG20-203ENST00000565256 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
SNHG20-203ENST00000565256 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
SNHG20-203ENST00000565256 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
SNHG20-203ENST00000565256 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
SNHG20-203ENST00000565256 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
SNHG20-203ENST00000565256 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
SNHG20-203ENST00000565256 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
SNHG20-203ENST00000565256 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
SNHG20-203ENST00000565256 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
SNHG20-203ENST00000565256 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
SNHG20-203ENST00000565256 CYB5RLQ6IPT4 315 aa22.26■■□□□ 1.15
SNHG20-203ENST00000565256 CUX1P39880 1505 aa22.24■■□□□ 1.15
SNHG20-203ENST00000565256 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
SNHG20-203ENST00000565256 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
SNHG20-203ENST00000565256 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
SNHG20-203ENST00000565256 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
SNHG20-203ENST00000565256 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
SNHG20-203ENST00000565256 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
SNHG20-203ENST00000565256 CHD1O14646 1710 aa22.14■■□□□ 1.13
SNHG20-203ENST00000565256 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
SNHG20-203ENST00000565256 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.133e-10■■□□□ 14.3
SNHG20-203ENST00000565256 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
SNHG20-203ENST00000565256 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
SNHG20-203ENST00000565256 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
SNHG20-203ENST00000565256 FBLN2P98095 1184 aa21.99■■□□□ 1.11
SNHG20-203ENST00000565256 SOGA1O94964 1423 aa21.98■■□□□ 1.11
SNHG20-203ENST00000565256 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
SNHG20-203ENST00000565256 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
SNHG20-203ENST00000565256 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
SNHG20-203ENST00000565256 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
SNHG20-203ENST00000565256 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
SNHG20-203ENST00000565256 EEA1Q15075 1411 aa21.89■■□□□ 1.09
SNHG20-203ENST00000565256 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
SNHG20-203ENST00000565256 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
SNHG20-203ENST00000565256 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
SNHG20-203ENST00000565256 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
SNHG20-203ENST00000565256 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
SNHG20-203ENST00000565256 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
SNHG20-203ENST00000565256 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
SNHG20-203ENST00000565256 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
SNHG20-203ENST00000565256 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
SNHG20-203ENST00000565256 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
SNHG20-203ENST00000565256 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
SNHG20-203ENST00000565256 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
SNHG20-203ENST00000565256 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
SNHG20-203ENST00000565256 IGF1RP08069 1367 aa21.68■■□□□ 1.06
SNHG20-203ENST00000565256 KIF21BO75037 1637 aa21.62■■□□□ 1.05
SNHG20-203ENST00000565256 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
SNHG20-203ENST00000565256 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SNHG20-203ENST00000565256 ERCC6L2Q5T890 1561 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms