Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TMEM184A-203ENST00000319018 4374 ntTSL 514.76□□□□□ -0.053e-7■□□□□ 9.9
XRN2Q9H0D6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.141e-6■□□□□ 9.9
XRN2Q9H0D6 NOP56-213ENST00000480992 929 ntTSL 513.81□□□□□ -0.23e-11■□□□□ 9.9
XRN2Q9H0D6 SNX6-208ENST00000556712 851 ntTSL 512.23□□□□□ -0.458e-7■□□□□ 9.9
XRN2Q9H0D6 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.13□□□□□ -0.474e-6■□□□□ 9.9
XRN2Q9H0D6 SNX6-201ENST00000362031 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.488e-7■□□□□ 9.9
XRN2Q9H0D6 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.554e-6■□□□□ 9.9
XRN2Q9H0D6 PHC2-211ENST00000486897 547 ntTSL 511.18□□□□□ -0.624e-6■□□□□ 9.9
XRN2Q9H0D6 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.714e-6■□□□□ 9.9
XRN2Q9H0D6 NOP56-214ENST00000484998 998 ntTSL 510.04□□□□□ -0.83e-11■□□□□ 9.9
XRN2Q9H0D6 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.912e-16■□□□□ 9.9
XRN2Q9H0D6 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC8.88□□□□□ -0.991e-6■□□□□ 9.9
XRN2Q9H0D6 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.061e-6■□□□□ 9.9
XRN2Q9H0D6 HNRNPK-208ENST00000481820 957 ntTSL 25.96□□□□□ -1.462e-16■□□□□ 9.9
XRN2Q9H0D6 HNRNPK-210ENST00000492865 528 ntTSL 25.11□□□□□ -1.592e-16■□□□□ 9.9
XRN2Q9H0D6 SNX5-206ENST00000469704 696 ntTSL 331.6■■■□□ 2.652e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.57■■■□□ 2.322e-6■□□□□ 9.9
XRN2Q9H0D6 EHBP1L1-211ENST00000634639 1643 ntTSL 527.85■■■□□ 2.052e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-217ENST00000606557 1087 ntBASIC26.62■■□□□ 1.852e-6■□□□□ 9.9
XRN2Q9H0D6 EHBP1L1-208ENST00000533237 2267 ntTSL 526.02■■□□□ 1.762e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.452e-6■□□□□ 9.9
XRN2Q9H0D6 WDR1-213ENST00000509600 559 ntTSL 223.67■■□□□ 1.382e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.19■■□□□ 1.32e-6■□□□□ 9.9
XRN2Q9H0D6 EHBP1L1-210ENST00000533465 793 ntTSL 322.99■■□□□ 1.272e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-216ENST00000599488 514 ntTSL 422.8■■□□□ 1.246e-8■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-215ENST00000599137 608 ntTSL 422.09■■□□□ 1.136e-8■□□□□ 9.9
XRN2Q9H0D6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.95■■□□□ 1.12e-6■□□□□ 9.9
XRN2Q9H0D6 CALR-205ENST00000587486 957 ntTSL 219.74■□□□□ 0.756e-9■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-207ENST00000595136 531 ntTSL 419.68■□□□□ 0.746e-8■□□□□ 9.9
XRN2Q9H0D6 PA2G4-207ENST00000553057 687 ntTSL 219.41■□□□□ 0.72e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-203ENST00000419004 778 ntTSL 519.02■□□□□ 0.642e-6■□□□□ 9.9
XRN2Q9H0D6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.71■□□□□ 0.432e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-219ENST00000601147 583 ntTSL 217.49■□□□□ 0.396e-8■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-211ENST00000596213 929 ntTSL 317.16■□□□□ 0.346e-8■□□□□ 9.9
XRN2Q9H0D6 OVOL2-204ENST00000486776 550 ntTSL 316.56■□□□□ 0.242e-6■□□□□ 9.9
XRN2Q9H0D6 CALR-207ENST00000590325 781 ntTSL 216.51■□□□□ 0.236e-9■□□□□ 9.9
XRN2Q9H0D6 SNX5-214ENST00000490175 2025 ntTSL 1 (best)16.46■□□□□ 0.232e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-205ENST00000595067 548 ntTSL 416.34■□□□□ 0.216e-8■□□□□ 9.9
XRN2Q9H0D6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.122e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-218ENST00000600247 583 ntTSL 415.38■□□□□ 0.056e-8■□□□□ 9.9
XRN2Q9H0D6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.022e-6■□□□□ 9.9
XRN2Q9H0D6 PRPF38B-204ENST00000467302 2043 ntTSL 1 (best)14.85□□□□□ -0.032e-6■□□□□ 9.9
XRN2Q9H0D6 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC13.87□□□□□ -0.192e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-213ENST00000597994 470 ntTSL 413.46□□□□□ -0.256e-8■□□□□ 9.9
XRN2Q9H0D6 EHBP1L1-202ENST00000526990 3169 nt12.67□□□□□ -0.382e-6■□□□□ 9.9
XRN2Q9H0D6 ARID1A-203ENST00000430291 580 ntTSL 411.62□□□□□ -0.556e-8■□□□□ 9.9
XRN2Q9H0D6 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 510.85□□□□□ -0.676e-8■□□□□ 9.9
XRN2Q9H0D6 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.762e-6■□□□□ 9.9
XRN2Q9H0D6 AKAP8L-210ENST00000596195 553 ntTSL 410.01□□□□□ -0.816e-8■□□□□ 9.9
XRN2Q9H0D6 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC9.79□□□□□ -0.842e-6■□□□□ 9.9
XRN2Q9H0D6 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.96e-8■□□□□ 9.9
XRN2Q9H0D6 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.93□□□□□ -0.986e-8■□□□□ 9.9
XRN2Q9H0D6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.352e-6■□□□□ 9.9
XRN2Q9H0D6 SNX5-207ENST00000474883 695 ntTSL 54.39□□□□□ -1.712e-6■□□□□ 9.9
XRN2Q9H0D6 PA2G4-202ENST00000550166 520 ntTSL 34.26□□□□□ -1.732e-6■□□□□ 9.9
XRN2Q9H0D6 AGFG2-204ENST00000474713 1864 ntTSL 518.67■□□□□ 0.581e-8■□□□□ 9.9
XRN2Q9H0D6 BCL2L2-204ENST00000556599 548 ntTSL 321.14■□□□□ 0.971e-16■□□□□ 9.9
XRN2Q9H0D6 ZMYND8-215ENST00000468376 4064 ntTSL 1 (best)9.92□□□□□ -0.825e-8■□□□□ 9.9
XRN2Q9H0D6 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)9.32□□□□□ -0.925e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-210ENST00000621152 500 ntTSL 324.55■■□□□ 1.524e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-206ENST00000446852 2460 ntTSL 1 (best)17.99■□□□□ 0.474e-8■□□□□ 9.9
XRN2Q9H0D6 LTBP3-209ENST00000527792 923 ntTSL 217.24■□□□□ 0.354e-8■□□□□ 9.9
XRN2Q9H0D6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.264e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.164e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-204ENST00000428868 544 ntTSL 49.73□□□□□ -0.854e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.024e-8■□□□□ 9.9
XRN2Q9H0D6 LTBP3-215ENST00000529764 528 ntTSL 57.83□□□□□ -1.164e-8■□□□□ 9.9
XRN2Q9H0D6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.724e-8■□□□□ 9.9
XRN2Q9H0D6 APOC1-206ENST00000590334 508 ntTSL 513.65□□□□□ -0.226e-8■□□□□ 9.9
XRN2Q9H0D6 APOC1-204ENST00000589078 213 ntTSL 211.42□□□□□ -0.586e-8■□□□□ 9.9
XRN2Q9H0D6 APOC1-201ENST00000586638 425 ntTSL 3 BASIC11.37□□□□□ -0.596e-8■□□□□ 9.9
XRN2Q9H0D6 APOC1-207ENST00000592176 514 ntTSL 511.37□□□□□ -0.596e-8■□□□□ 9.9
XRN2Q9H0D6 ATXN1-206ENST00000483591 892 ntTSL 1 (best)9.87□□□□□ -0.831e-6■□□□□ 9.9
XRN2Q9H0D6 ATXN1-209ENST00000495178 853 ntTSL 1 (best)3.25□□□□□ -1.891e-6■□□□□ 9.9
XRN2Q9H0D6 ABHD5-207ENST00000486764 618 ntTSL 224.47■■□□□ 1.513e-6■□□□□ 9.8
XRN2Q9H0D6 ABHD5-201ENST00000013894 833 ntTSL 321.05■□□□□ 0.963e-6■□□□□ 9.8
XRN2Q9H0D6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.893e-6■□□□□ 9.8
XRN2Q9H0D6 ABHD5-204ENST00000456453 876 ntTSL 416.38■□□□□ 0.213e-6■□□□□ 9.8
XRN2Q9H0D6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.971e-6■□□□□ 9.8
XRN2Q9H0D6 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.78□□□□□ -0.21e-6■□□□□ 9.8
XRN2Q9H0D6 CDC14B-204ENST00000412285 5271 ntTSL 1 (best)9.46□□□□□ -0.891e-6■□□□□ 9.8
XRN2Q9H0D6 CDC14B-213ENST00000496750 649 ntTSL 34.75□□□□□ -1.651e-6■□□□□ 9.8
XRN2Q9H0D6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.426e-15■□□□□ 9.8
XRN2Q9H0D6 EGLN3-208ENST00000551935 575 ntTSL 417.97■□□□□ 0.476e-15■□□□□ 9.8
XRN2Q9H0D6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.486e-8■□□□□ 9.8
XRN2Q9H0D6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.376e-8■□□□□ 9.8
XRN2Q9H0D6 BMP4-208ENST00000559642 505 ntTSL 315.24■□□□□ 0.036e-8■□□□□ 9.8
XRN2Q9H0D6 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.46e-8■□□□□ 9.8
XRN2Q9H0D6 CPSF1-202ENST00000527827 619 ntTSL 228.95■■■□□ 2.224e-7■□□□□ 9.8
XRN2Q9H0D6 ASPSCR1-214ENST00000582404 534 ntTSL 321.42■■□□□ 1.027e-23■□□□□ 9.8
XRN2Q9H0D6 MBD6-214ENST00000552659 530 ntTSL 315.95■□□□□ 0.144e-6■□□□□ 9.8
XRN2Q9H0D6 UBE2L3-203ENST00000496722 3451 ntTSL 213.72□□□□□ -0.211e-6■□□□□ 9.8
XRN2Q9H0D6 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.93□□□□□ -0.341e-6■□□□□ 9.8
XRN2Q9H0D6 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.451e-6■□□□□ 9.8
XRN2Q9H0D6 UBE2L3-202ENST00000458578 3007 ntTSL 2 BASIC11.05□□□□□ -0.641e-6■□□□□ 9.8
XRN2Q9H0D6 BCL2L2-PABPN1-202ENST00000556100 655 ntTSL 315.61■□□□□ 0.091e-7■□□□□ 9.8
XRN2Q9H0D6 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.391e-7■□□□□ 9.8
XRN2Q9H0D6 JMJD8-214ENST00000569441 1428 ntTSL 535.07■■■■□ 3.211e-9■□□□□ 9.8
XRN2Q9H0D6 JMJD8-212ENST00000568689 1998 ntTSL 331.61■■■□□ 2.651e-9■□□□□ 9.8
XRN2Q9H0D6 RNF220-216ENST00000488865 860 ntTSL 231.55■■■□□ 2.641e-9■□□□□ 9.8
Retrieved 100 of 21,068 protein–RNA pairs in 95.9 ms