RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
SNX5-203ENST00000419004 ABCC9O60706 1549 aa36.74■■■■□ 3.47
SNX5-203ENST00000419004 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
SNX5-203ENST00000419004 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
SNX5-203ENST00000419004 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
SNX5-203ENST00000419004 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.05
SNX5-203ENST00000419004 PABPN1Q86U42 306 aaKnown RBP eCLIP33.92■■■■□ 3.02
SNX5-203ENST00000419004 NACADO15069 1562 aa33.34■■■□□ 2.93
SNX5-203ENST00000419004 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
SNX5-203ENST00000419004 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
SNX5-203ENST00000419004 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
SNX5-203ENST00000419004 CC2D2AQ9P2K1 1620 aa33.07■■■□□ 2.88
SNX5-203ENST00000419004 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
SNX5-203ENST00000419004 CUX2O14529 1486 aa32.51■■■□□ 2.79
SNX5-203ENST00000419004 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
SNX5-203ENST00000419004 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
SNX5-203ENST00000419004 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
SNX5-203ENST00000419004 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
SNX5-203ENST00000419004 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
SNX5-203ENST00000419004 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
SNX5-203ENST00000419004 AEBP2Q6ZN18 517 aaPredicted RBP31.2■■■□□ 2.59
SNX5-203ENST00000419004 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
SNX5-203ENST00000419004 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
SNX5-203ENST00000419004 NESP48681 1621 aa30.95■■■□□ 2.55
SNX5-203ENST00000419004 NCAPD3P42695 1498 aa30.8■■■□□ 2.52
SNX5-203ENST00000419004 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
SNX5-203ENST00000419004 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
SNX5-203ENST00000419004 SMARCA2P51531 1590 aa30.68■■■□□ 2.5
SNX5-203ENST00000419004 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
SNX5-203ENST00000419004 TRHP20396 242 aaPredicted RBP30.54■■■□□ 2.48
SNX5-203ENST00000419004 RIMBP3CA6NJZ7 1639 aa30.5■■■□□ 2.47
SNX5-203ENST00000419004 RIMBP3BA6NNM3 1639 aa30.5■■■□□ 2.47
SNX5-203ENST00000419004 RIMBP3Q9UFD9 1639 aa30.5■■■□□ 2.47
SNX5-203ENST00000419004 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
SNX5-203ENST00000419004 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
SNX5-203ENST00000419004 ATAD2BQ9ULI0 1458 aa30.41■■■□□ 2.46
SNX5-203ENST00000419004 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
SNX5-203ENST00000419004 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
SNX5-203ENST00000419004 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
SNX5-203ENST00000419004 ARHGEF11O15085 1522 aa30.19■■■□□ 2.42
SNX5-203ENST00000419004 ILDR1Q86SU0 546 aaPredicted RBP30.19■■■□□ 2.42
SNX5-203ENST00000419004 CYB5RLQ6IPT4 315 aa30.18■■■□□ 2.42
SNX5-203ENST00000419004 WDR62O43379 1518 aa30.16■■■□□ 2.42
SNX5-203ENST00000419004 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
SNX5-203ENST00000419004 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
SNX5-203ENST00000419004 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
SNX5-203ENST00000419004 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
SNX5-203ENST00000419004 CEP164Q9UPV0 1460 aa29.67■■■□□ 2.34
SNX5-203ENST00000419004 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
SNX5-203ENST00000419004 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
SNX5-203ENST00000419004 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
SNX5-203ENST00000419004 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SNX5-203ENST00000419004 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
SNX5-203ENST00000419004 CHD1O14646 1710 aa29.19■■■□□ 2.26
SNX5-203ENST00000419004 IFT140Q96RY7 1462 aa29.16■■■□□ 2.26
SNX5-203ENST00000419004 FBLN2P98095 1184 aa29.1■■■□□ 2.25
SNX5-203ENST00000419004 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
SNX5-203ENST00000419004 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
SNX5-203ENST00000419004 CFTRP13569 1480 aa28.99■■■□□ 2.23
SNX5-203ENST00000419004 KDM4FA0A1W2PPD8 638 aa28.95■■■□□ 2.22
SNX5-203ENST00000419004 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
SNX5-203ENST00000419004 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.22e-7■■■■□ 19.9
SNX5-203ENST00000419004 FBXO41Q8TF61 875 aa28.71■■■□□ 2.19
SNX5-203ENST00000419004 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
SNX5-203ENST00000419004 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
SNX5-203ENST00000419004 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
SNX5-203ENST00000419004 SYNJ1O43426 1573 aa28.63■■■□□ 2.17
SNX5-203ENST00000419004 WIZO95785 1651 aa28.58■■■□□ 2.17
SNX5-203ENST00000419004 LMTK3Q96Q04 1460 aa28.58■■■□□ 2.17
SNX5-203ENST00000419004 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
SNX5-203ENST00000419004 CHMP7Q8WUX9 453 aaPredicted RBP28.54■■■□□ 2.16
SNX5-203ENST00000419004 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
SNX5-203ENST00000419004 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
SNX5-203ENST00000419004 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
SNX5-203ENST00000419004 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
SNX5-203ENST00000419004 SOCS7O14512 581 aa28.43■■■□□ 2.14
SNX5-203ENST00000419004 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
SNX5-203ENST00000419004 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
SNX5-203ENST00000419004 KDM6BO15054 1643 aa28.32■■■□□ 2.12
SNX5-203ENST00000419004 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
SNX5-203ENST00000419004 FAM69CQ0P6D2 419 aa28.29■■■□□ 2.12
SNX5-203ENST00000419004 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
SNX5-203ENST00000419004 ADGRL1O94910 1474 aa28.22■■■□□ 2.11
SNX5-203ENST00000419004 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
SNX5-203ENST00000419004 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
SNX5-203ENST00000419004 ILDR2Q71H61 639 aa28.19■■■□□ 2.1
SNX5-203ENST00000419004 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
SNX5-203ENST00000419004 ABCC10Q5T3U5 1492 aa28.15■■■□□ 2.1
SNX5-203ENST00000419004 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
SNX5-203ENST00000419004 SOGA1O94964 1423 aa28.09■■■□□ 2.09
SNX5-203ENST00000419004 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.08
SNX5-203ENST00000419004 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
SNX5-203ENST00000419004 DISP3Q9P2K9 1392 aa28.01■■■□□ 2.07
SNX5-203ENST00000419004 DIP2BQ9P265 1576 aa27.99■■■□□ 2.07
SNX5-203ENST00000419004 TSPOAP1O95153 1857 aa27.96■■■□□ 2.07
SNX5-203ENST00000419004 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
SNX5-203ENST00000419004 NPM1P06748 294 aaKnown RBP eCLIP27.94■■■□□ 2.066e-41■□□□□ 10.1
SNX5-203ENST00000419004 MAPKBP1O60336 1514 aa27.88■■■□□ 2.05
SNX5-203ENST00000419004 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
SNX5-203ENST00000419004 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms