RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
PRPF38B-201ENST00000370021 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-201ENST00000370021 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
PRPF38B-201ENST00000370021 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
PRPF38B-201ENST00000370021 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
PRPF38B-201ENST00000370021 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
PRPF38B-201ENST00000370021 HRCP23327 699 aa17.2■□□□□ 0.34
PRPF38B-201ENST00000370021 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
PRPF38B-201ENST00000370021 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
PRPF38B-201ENST00000370021 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.27
PRPF38B-201ENST00000370021 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
PRPF38B-201ENST00000370021 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
PRPF38B-201ENST00000370021 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
PRPF38B-201ENST00000370021 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
PRPF38B-201ENST00000370021 MYO15BQ96JP2 1530 aa16.49■□□□□ 0.23
PRPF38B-201ENST00000370021 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.22
PRPF38B-201ENST00000370021 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
PRPF38B-201ENST00000370021 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
PRPF38B-201ENST00000370021 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-201ENST00000370021 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
PRPF38B-201ENST00000370021 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
PRPF38B-201ENST00000370021 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
PRPF38B-201ENST00000370021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
PRPF38B-201ENST00000370021 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
PRPF38B-201ENST00000370021 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
PRPF38B-201ENST00000370021 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-201ENST00000370021 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
PRPF38B-201ENST00000370021 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-201ENST00000370021 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
PRPF38B-201ENST00000370021 MYT1Q01538 1121 aa15.8■□□□□ 0.12
PRPF38B-201ENST00000370021 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
PRPF38B-201ENST00000370021 ABCC9O60706 1549 aa15.71■□□□□ 0.1
PRPF38B-201ENST00000370021 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
PRPF38B-201ENST00000370021 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
PRPF38B-201ENST00000370021 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
PRPF38B-201ENST00000370021 MIER1Q8N108 512 aa15.5■□□□□ 0.07
PRPF38B-201ENST00000370021 BCANQ96GW7 911 aa15.47■□□□□ 0.07
PRPF38B-201ENST00000370021 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
PRPF38B-201ENST00000370021 APLP2Q06481 763 aa15.44■□□□□ 0.06
PRPF38B-201ENST00000370021 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
PRPF38B-201ENST00000370021 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
PRPF38B-201ENST00000370021 ITGAEP38570 1179 aa15.3■□□□□ 0.04
PRPF38B-201ENST00000370021 NACADO15069 1562 aa15.28■□□□□ 0.04
PRPF38B-201ENST00000370021 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
PRPF38B-201ENST00000370021 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
PRPF38B-201ENST00000370021 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
PRPF38B-201ENST00000370021 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
PRPF38B-201ENST00000370021 WIZO95785 1651 aa15.13■□□□□ 0.01
PRPF38B-201ENST00000370021 NEFLP07196 543 aa15.12■□□□□ 0.01
PRPF38B-201ENST00000370021 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
PRPF38B-201ENST00000370021 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
PRPF38B-201ENST00000370021 FKBP8Q14318 412 aa15.08■□□□□ 0
PRPF38B-201ENST00000370021 BCL11AQ9H165 835 aa15.06■□□□□ 0
PRPF38B-201ENST00000370021 ANP32EQ9BTT0 268 aa15.04■□□□□ -0
PRPF38B-201ENST00000370021 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
PRPF38B-201ENST00000370021 ATP1B4Q9UN42 357 aaPredicted RBP15.02□□□□□ -0.01
PRPF38B-201ENST00000370021 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
PRPF38B-201ENST00000370021 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
PRPF38B-201ENST00000370021 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
PRPF38B-201ENST00000370021 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
PRPF38B-201ENST00000370021 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
PRPF38B-201ENST00000370021 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
PRPF38B-201ENST00000370021 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
PRPF38B-201ENST00000370021 DDX10Q13206 875 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-201ENST00000370021 IRX6P78412 446 aaPredicted RBP14.91□□□□□ -0.02
PRPF38B-201ENST00000370021 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
PRPF38B-201ENST00000370021 TOP2AP11388 1531 aaKnown RBP14.88□□□□□ -0.03
PRPF38B-201ENST00000370021 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
PRPF38B-201ENST00000370021 SOGA1O94964 1423 aa14.82□□□□□ -0.04
PRPF38B-201ENST00000370021 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRPF38B-201ENST00000370021 RBM19Q9Y4C8 960 aaKnown RBP14.77□□□□□ -0.05
PRPF38B-201ENST00000370021 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
PRPF38B-201ENST00000370021 ABCC8Q09428 1581 aa14.75□□□□□ -0.05
PRPF38B-201ENST00000370021 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
PRPF38B-201ENST00000370021 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
PRPF38B-201ENST00000370021 NBR1Q14596 966 aa14.71□□□□□ -0.05
PRPF38B-201ENST00000370021 ANP32CO43423 234 aa14.71□□□□□ -0.05
PRPF38B-201ENST00000370021 CDK11AQ9UQ88 783 aaPredicted RBP14.71□□□□□ -0.05
PRPF38B-201ENST00000370021 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
PRPF38B-201ENST00000370021 CLSPNQ9HAW4 1339 aa14.69□□□□□ -0.06
PRPF38B-201ENST00000370021 TNIKQ9UKE5 1360 aa14.69□□□□□ -0.06
PRPF38B-201ENST00000370021 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
PRPF38B-201ENST00000370021 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
PRPF38B-201ENST00000370021 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRPF38B-201ENST00000370021 POLR3GLQ9BT43 218 aa14.66□□□□□ -0.06
PRPF38B-201ENST00000370021 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
PRPF38B-201ENST00000370021 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
PRPF38B-201ENST00000370021 CLIP1P30622 1438 aa14.65□□□□□ -0.06
PRPF38B-201ENST00000370021 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
PRPF38B-201ENST00000370021 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
PRPF38B-201ENST00000370021 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
PRPF38B-201ENST00000370021 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
PRPF38B-201ENST00000370021 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
PRPF38B-201ENST00000370021 EEA1Q15075 1411 aa14.51□□□□□ -0.09
PRPF38B-201ENST00000370021 RTL5Q5HYW3 569 aaPredicted RBP14.51□□□□□ -0.09
PRPF38B-201ENST00000370021 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
PRPF38B-201ENST00000370021 NPM2Q86SE8 214 aaKnown RBP14.5□□□□□ -0.09
PRPF38B-201ENST00000370021 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
PRPF38B-201ENST00000370021 DHX57Q6P158 1386 aaKnown RBP14.48□□□□□ -0.09
PRPF38B-201ENST00000370021 KIF21BO75037 1637 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms