RNA–Protein interactions for RNA: ENST00000256830.13

NEDD4L-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 2,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-201ENST00000256830 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
NEDD4L-201ENST00000256830 PPARGC1BQ86YN6 1023 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-201ENST00000256830 HRCP23327 699 aa16.25■□□□□ 0.19
NEDD4L-201ENST00000256830 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
NEDD4L-201ENST00000256830 ABCC9O60706 1549 aa16■□□□□ 0.15
NEDD4L-201ENST00000256830 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
NEDD4L-201ENST00000256830 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
NEDD4L-201ENST00000256830 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.12
NEDD4L-201ENST00000256830 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
NEDD4L-201ENST00000256830 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
NEDD4L-201ENST00000256830 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
NEDD4L-201ENST00000256830 MYO15BQ96JP2 1530 aa15.57■□□□□ 0.08
NEDD4L-201ENST00000256830 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
NEDD4L-201ENST00000256830 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
NEDD4L-201ENST00000256830 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
NEDD4L-201ENST00000256830 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.021e-13■■□□□ 13
NEDD4L-201ENST00000256830 GTF3C3Q9Y5Q9 886 aa15.2■□□□□ 0.02
NEDD4L-201ENST00000256830 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
NEDD4L-201ENST00000256830 MYT1Q01538 1121 aa15.13■□□□□ 0.01
NEDD4L-201ENST00000256830 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
NEDD4L-201ENST00000256830 ACIN1Q9UKV3 1341 aaKnown RBP15.1■□□□□ 0.01
NEDD4L-201ENST00000256830 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
NEDD4L-201ENST00000256830 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
NEDD4L-201ENST00000256830 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.02
NEDD4L-201ENST00000256830 NACADO15069 1562 aa14.92□□□□□ -0.02
NEDD4L-201ENST00000256830 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
NEDD4L-201ENST00000256830 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
NEDD4L-201ENST00000256830 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
NEDD4L-201ENST00000256830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
NEDD4L-201ENST00000256830 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.03
NEDD4L-201ENST00000256830 CENPBP07199 599 aaPredicted RBP14.81□□□□□ -0.04
NEDD4L-201ENST00000256830 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
NEDD4L-201ENST00000256830 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.04
NEDD4L-201ENST00000256830 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
NEDD4L-201ENST00000256830 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
NEDD4L-201ENST00000256830 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
NEDD4L-201ENST00000256830 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
NEDD4L-201ENST00000256830 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
NEDD4L-201ENST00000256830 MIER1Q8N108 512 aa14.45□□□□□ -0.1
NEDD4L-201ENST00000256830 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
NEDD4L-201ENST00000256830 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
NEDD4L-201ENST00000256830 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
NEDD4L-201ENST00000256830 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
NEDD4L-201ENST00000256830 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
NEDD4L-201ENST00000256830 BCANQ96GW7 911 aa14.31□□□□□ -0.12
NEDD4L-201ENST00000256830 ZNF316A6NFI3 1004 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-201ENST00000256830 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
NEDD4L-201ENST00000256830 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.13
NEDD4L-201ENST00000256830 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
NEDD4L-201ENST00000256830 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
NEDD4L-201ENST00000256830 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
NEDD4L-201ENST00000256830 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
NEDD4L-201ENST00000256830 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-201ENST00000256830 ITGAEP38570 1179 aa14.04□□□□□ -0.16
NEDD4L-201ENST00000256830 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
NEDD4L-201ENST00000256830 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
NEDD4L-201ENST00000256830 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
NEDD4L-201ENST00000256830 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
NEDD4L-201ENST00000256830 WIZO95785 1651 aa13.98□□□□□ -0.17
NEDD4L-201ENST00000256830 FKBP8Q14318 412 aa13.95□□□□□ -0.18
NEDD4L-201ENST00000256830 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-201ENST00000256830 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
NEDD4L-201ENST00000256830 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
NEDD4L-201ENST00000256830 MSH5O43196 834 aa13.9□□□□□ -0.18
NEDD4L-201ENST00000256830 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
NEDD4L-201ENST00000256830 NESP48681 1621 aa13.88□□□□□ -0.19
NEDD4L-201ENST00000256830 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
NEDD4L-201ENST00000256830 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
NEDD4L-201ENST00000256830 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
NEDD4L-201ENST00000256830 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
NEDD4L-201ENST00000256830 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
NEDD4L-201ENST00000256830 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
NEDD4L-201ENST00000256830 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
NEDD4L-201ENST00000256830 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
NEDD4L-201ENST00000256830 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
NEDD4L-201ENST00000256830 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
NEDD4L-201ENST00000256830 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
NEDD4L-201ENST00000256830 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
NEDD4L-201ENST00000256830 NBR1Q14596 966 aa13.72□□□□□ -0.21
NEDD4L-201ENST00000256830 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
NEDD4L-201ENST00000256830 SOGA1O94964 1423 aa13.7□□□□□ -0.22
NEDD4L-201ENST00000256830 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
NEDD4L-201ENST00000256830 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
NEDD4L-201ENST00000256830 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
NEDD4L-201ENST00000256830 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
NEDD4L-201ENST00000256830 NEFLP07196 543 aa13.67□□□□□ -0.22
NEDD4L-201ENST00000256830 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
NEDD4L-201ENST00000256830 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
NEDD4L-201ENST00000256830 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.22
NEDD4L-201ENST00000256830 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
NEDD4L-201ENST00000256830 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
NEDD4L-201ENST00000256830 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
NEDD4L-201ENST00000256830 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
NEDD4L-201ENST00000256830 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
NEDD4L-201ENST00000256830 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
NEDD4L-201ENST00000256830 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
NEDD4L-201ENST00000256830 CDK11AQ9UQ88 783 aaPredicted RBP13.49□□□□□ -0.25
NEDD4L-201ENST00000256830 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
NEDD4L-201ENST00000256830 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
NEDD4L-201ENST00000256830 CFTRP13569 1480 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms