RNA–Protein interactions for RNA: ENST00000615191.4

ARID1A-209, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 5 BASIC

Gene ARID1A, Length 3,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-209ENST00000615191 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
ARID1A-209ENST00000615191 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
ARID1A-209ENST00000615191 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
ARID1A-209ENST00000615191 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.1
ARID1A-209ENST00000615191 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
ARID1A-209ENST00000615191 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
ARID1A-209ENST00000615191 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
ARID1A-209ENST00000615191 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
ARID1A-209ENST00000615191 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
ARID1A-209ENST00000615191 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
ARID1A-209ENST00000615191 LOC105371045A0A1W2PR82 267 aa14.63□□□□□ -0.07
ARID1A-209ENST00000615191 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
ARID1A-209ENST00000615191 HRCP23327 699 aa14.45□□□□□ -0.1
ARID1A-209ENST00000615191 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
ARID1A-209ENST00000615191 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
ARID1A-209ENST00000615191 ABCC9O60706 1549 aa14.31□□□□□ -0.12
ARID1A-209ENST00000615191 TTBK1Q5TCY1 1321 aaPredicted RBP14.28□□□□□ -0.12
ARID1A-209ENST00000615191 TRIM26Q12899 539 aaPredicted RBP14.24□□□□□ -0.13
ARID1A-209ENST00000615191 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
ARID1A-209ENST00000615191 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
ARID1A-209ENST00000615191 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
ARID1A-209ENST00000615191 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
ARID1A-209ENST00000615191 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
ARID1A-209ENST00000615191 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
ARID1A-209ENST00000615191 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
ARID1A-209ENST00000615191 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
ARID1A-209ENST00000615191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
ARID1A-209ENST00000615191 NACADO15069 1562 aa13.87□□□□□ -0.19
ARID1A-209ENST00000615191 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
ARID1A-209ENST00000615191 APLP2Q06481 763 aa13.8□□□□□ -0.2
ARID1A-209ENST00000615191 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
ARID1A-209ENST00000615191 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
ARID1A-209ENST00000615191 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
ARID1A-209ENST00000615191 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
ARID1A-209ENST00000615191 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
ARID1A-209ENST00000615191 WIZO95785 1651 aa13.59□□□□□ -0.23
ARID1A-209ENST00000615191 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
ARID1A-209ENST00000615191 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.24
ARID1A-209ENST00000615191 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
ARID1A-209ENST00000615191 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
ARID1A-209ENST00000615191 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
ARID1A-209ENST00000615191 ITGAEP38570 1179 aa13.48□□□□□ -0.25
ARID1A-209ENST00000615191 SOGA1O94964 1423 aa13.46□□□□□ -0.25
ARID1A-209ENST00000615191 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
ARID1A-209ENST00000615191 CEP162Q5TB80 1403 aa13.43□□□□□ -0.26
ARID1A-209ENST00000615191 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
ARID1A-209ENST00000615191 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
ARID1A-209ENST00000615191 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
ARID1A-209ENST00000615191 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
ARID1A-209ENST00000615191 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
ARID1A-209ENST00000615191 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
ARID1A-209ENST00000615191 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
ARID1A-209ENST00000615191 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
ARID1A-209ENST00000615191 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
ARID1A-209ENST00000615191 CLIP1P30622 1438 aa13.27□□□□□ -0.28
ARID1A-209ENST00000615191 GOLGA3Q08378 1498 aa13.27□□□□□ -0.29
ARID1A-209ENST00000615191 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
ARID1A-209ENST00000615191 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
ARID1A-209ENST00000615191 EEA1Q15075 1411 aa13.24□□□□□ -0.29
ARID1A-209ENST00000615191 BAZ1BQ9UIG0 1483 aaKnown RBP13.22□□□□□ -0.29
ARID1A-209ENST00000615191 P3H3Q8IVL6 736 aa13.22□□□□□ -0.29
ARID1A-209ENST00000615191 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
ARID1A-209ENST00000615191 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
ARID1A-209ENST00000615191 MIER1Q8N108 512 aa13.16□□□□□ -0.3
ARID1A-209ENST00000615191 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
ARID1A-209ENST00000615191 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
ARID1A-209ENST00000615191 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
ARID1A-209ENST00000615191 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
ARID1A-209ENST00000615191 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
ARID1A-209ENST00000615191 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
ARID1A-209ENST00000615191 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
ARID1A-209ENST00000615191 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
ARID1A-209ENST00000615191 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
ARID1A-209ENST00000615191 ARID3CA6NKF2 412 aa12.97□□□□□ -0.33
ARID1A-209ENST00000615191 HIRIP3Q9BW71 556 aaPredicted RBP12.95□□□□□ -0.34
ARID1A-209ENST00000615191 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
ARID1A-209ENST00000615191 BCANQ96GW7 911 aa12.91□□□□□ -0.34
ARID1A-209ENST00000615191 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
ARID1A-209ENST00000615191 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
ARID1A-209ENST00000615191 CUX2O14529 1486 aa12.89□□□□□ -0.35
ARID1A-209ENST00000615191 SIN3AQ96ST3 1273 aa12.88□□□□□ -0.35
ARID1A-209ENST00000615191 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
ARID1A-209ENST00000615191 NEFLP07196 543 aa12.86□□□□□ -0.35
ARID1A-209ENST00000615191 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
ARID1A-209ENST00000615191 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
ARID1A-209ENST00000615191 KIF21BO75037 1637 aa12.84□□□□□ -0.35
ARID1A-209ENST00000615191 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
ARID1A-209ENST00000615191 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
ARID1A-209ENST00000615191 POLR3GLQ9BT43 218 aa12.81□□□□□ -0.36
ARID1A-209ENST00000615191 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
ARID1A-209ENST00000615191 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
ARID1A-209ENST00000615191 ANP32CO43423 234 aa12.78□□□□□ -0.36
ARID1A-209ENST00000615191 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
ARID1A-209ENST00000615191 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
ARID1A-209ENST00000615191 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
ARID1A-209ENST00000615191 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
ARID1A-209ENST00000615191 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
ARID1A-209ENST00000615191 CADPSQ9ULU8 1353 aa12.74□□□□□ -0.37
ARID1A-209ENST00000615191 IGF1RP08069 1367 aa12.73□□□□□ -0.37
ARID1A-209ENST00000615191 RRP7BPQ9NSQ0 103 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms