RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
LTBP3-215ENST00000529764 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
LTBP3-215ENST00000529764 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.11
LTBP3-215ENST00000529764 ABCC9O60706 1549 aa14.1□□□□□ -0.15
LTBP3-215ENST00000529764 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
LTBP3-215ENST00000529764 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.23
LTBP3-215ENST00000529764 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
LTBP3-215ENST00000529764 NACADO15069 1562 aa13.52□□□□□ -0.25
LTBP3-215ENST00000529764 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
LTBP3-215ENST00000529764 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
LTBP3-215ENST00000529764 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
LTBP3-215ENST00000529764 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
LTBP3-215ENST00000529764 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
LTBP3-215ENST00000529764 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
LTBP3-215ENST00000529764 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
LTBP3-215ENST00000529764 SCRIBQ14160 1630 aa13.02□□□□□ -0.32
LTBP3-215ENST00000529764 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
LTBP3-215ENST00000529764 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
LTBP3-215ENST00000529764 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
LTBP3-215ENST00000529764 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
LTBP3-215ENST00000529764 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
LTBP3-215ENST00000529764 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
LTBP3-215ENST00000529764 SMARCA2P51531 1590 aa12.46□□□□□ -0.42
LTBP3-215ENST00000529764 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
LTBP3-215ENST00000529764 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
LTBP3-215ENST00000529764 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
LTBP3-215ENST00000529764 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
LTBP3-215ENST00000529764 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
LTBP3-215ENST00000529764 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
LTBP3-215ENST00000529764 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
LTBP3-215ENST00000529764 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
LTBP3-215ENST00000529764 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
LTBP3-215ENST00000529764 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
LTBP3-215ENST00000529764 WIZO95785 1651 aa12.16□□□□□ -0.46
LTBP3-215ENST00000529764 CUX2O14529 1486 aa12.14□□□□□ -0.47
LTBP3-215ENST00000529764 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
LTBP3-215ENST00000529764 NESP48681 1621 aa12.11□□□□□ -0.47
LTBP3-215ENST00000529764 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
LTBP3-215ENST00000529764 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
LTBP3-215ENST00000529764 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
LTBP3-215ENST00000529764 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.49
LTBP3-215ENST00000529764 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
LTBP3-215ENST00000529764 CEP164Q9UPV0 1460 aa11.97□□□□□ -0.49
LTBP3-215ENST00000529764 CFTRP13569 1480 aa11.95□□□□□ -0.5
LTBP3-215ENST00000529764 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
LTBP3-215ENST00000529764 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
LTBP3-215ENST00000529764 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
LTBP3-215ENST00000529764 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
LTBP3-215ENST00000529764 WDR62O43379 1518 aa11.89□□□□□ -0.51
LTBP3-215ENST00000529764 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
LTBP3-215ENST00000529764 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
LTBP3-215ENST00000529764 FOXD1Q16676 465 aa11.8□□□□□ -0.52
LTBP3-215ENST00000529764 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
LTBP3-215ENST00000529764 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
LTBP3-215ENST00000529764 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
LTBP3-215ENST00000529764 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
LTBP3-215ENST00000529764 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
LTBP3-215ENST00000529764 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
LTBP3-215ENST00000529764 POLA1P09884 1462 aaPredicted RBP11.6□□□□□ -0.55
LTBP3-215ENST00000529764 SOGA1O94964 1423 aa11.6□□□□□ -0.55
LTBP3-215ENST00000529764 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
LTBP3-215ENST00000529764 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
LTBP3-215ENST00000529764 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
LTBP3-215ENST00000529764 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
LTBP3-215ENST00000529764 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
LTBP3-215ENST00000529764 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.566e-8■■■■□ 23.2
LTBP3-215ENST00000529764 CUX1P39880 1505 aa11.54□□□□□ -0.56
LTBP3-215ENST00000529764 FBLN2P98095 1184 aa11.53□□□□□ -0.56
LTBP3-215ENST00000529764 RAD54L2Q9Y4B4 1467 aa11.52□□□□□ -0.56
LTBP3-215ENST00000529764 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
LTBP3-215ENST00000529764 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
LTBP3-215ENST00000529764 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
LTBP3-215ENST00000529764 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
LTBP3-215ENST00000529764 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
LTBP3-215ENST00000529764 CHD1O14646 1710 aa11.47□□□□□ -0.57
LTBP3-215ENST00000529764 MAGI1Q96QZ7 1491 aaPredicted RBP11.47□□□□□ -0.57
LTBP3-215ENST00000529764 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.57
LTBP3-215ENST00000529764 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
LTBP3-215ENST00000529764 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.58
LTBP3-215ENST00000529764 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
LTBP3-215ENST00000529764 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
LTBP3-215ENST00000529764 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
LTBP3-215ENST00000529764 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
LTBP3-215ENST00000529764 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
LTBP3-215ENST00000529764 RIMBP3CA6NJZ7 1639 aa11.4□□□□□ -0.58
LTBP3-215ENST00000529764 RIMBP3BA6NNM3 1639 aa11.4□□□□□ -0.58
LTBP3-215ENST00000529764 RIMBP3Q9UFD9 1639 aa11.4□□□□□ -0.58
LTBP3-215ENST00000529764 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
LTBP3-215ENST00000529764 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
LTBP3-215ENST00000529764 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
LTBP3-215ENST00000529764 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
LTBP3-215ENST00000529764 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.6
LTBP3-215ENST00000529764 CLASP1Q7Z460 1538 aa11.31□□□□□ -0.6
LTBP3-215ENST00000529764 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
LTBP3-215ENST00000529764 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
LTBP3-215ENST00000529764 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
LTBP3-215ENST00000529764 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
LTBP3-215ENST00000529764 CUL7Q14999 1698 aa11.24□□□□□ -0.61
LTBP3-215ENST00000529764 NUP160Q12769 1436 aa11.24□□□□□ -0.61
LTBP3-215ENST00000529764 MSH5O43196 834 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms