RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
BMP4-208ENST00000559642 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
BMP4-208ENST00000559642 ABCC9O60706 1549 aa27.83■■■□□ 2.05
BMP4-208ENST00000559642 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
BMP4-208ENST00000559642 NACADO15069 1562 aa26.58■■□□□ 1.85
BMP4-208ENST00000559642 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
BMP4-208ENST00000559642 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
BMP4-208ENST00000559642 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
BMP4-208ENST00000559642 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
BMP4-208ENST00000559642 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
BMP4-208ENST00000559642 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
BMP4-208ENST00000559642 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
BMP4-208ENST00000559642 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
BMP4-208ENST00000559642 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
BMP4-208ENST00000559642 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
BMP4-208ENST00000559642 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
BMP4-208ENST00000559642 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
BMP4-208ENST00000559642 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
BMP4-208ENST00000559642 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
BMP4-208ENST00000559642 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
BMP4-208ENST00000559642 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
BMP4-208ENST00000559642 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
BMP4-208ENST00000559642 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
BMP4-208ENST00000559642 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
BMP4-208ENST00000559642 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
BMP4-208ENST00000559642 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
BMP4-208ENST00000559642 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
BMP4-208ENST00000559642 WIZO95785 1651 aa24.24■■□□□ 1.47
BMP4-208ENST00000559642 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
BMP4-208ENST00000559642 NESP48681 1621 aa24.06■■□□□ 1.44
BMP4-208ENST00000559642 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
BMP4-208ENST00000559642 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
BMP4-208ENST00000559642 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
BMP4-208ENST00000559642 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
BMP4-208ENST00000559642 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
BMP4-208ENST00000559642 CUX2O14529 1486 aa23.75■■□□□ 1.39
BMP4-208ENST00000559642 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
BMP4-208ENST00000559642 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
BMP4-208ENST00000559642 CFTRP13569 1480 aa23.63■■□□□ 1.37
BMP4-208ENST00000559642 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
BMP4-208ENST00000559642 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
BMP4-208ENST00000559642 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
BMP4-208ENST00000559642 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
BMP4-208ENST00000559642 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
BMP4-208ENST00000559642 WDR62O43379 1518 aa23.49■■□□□ 1.35
BMP4-208ENST00000559642 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
BMP4-208ENST00000559642 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
BMP4-208ENST00000559642 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
BMP4-208ENST00000559642 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
BMP4-208ENST00000559642 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
BMP4-208ENST00000559642 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
BMP4-208ENST00000559642 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
BMP4-208ENST00000559642 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
BMP4-208ENST00000559642 CUX1P39880 1505 aa22.98■■□□□ 1.27
BMP4-208ENST00000559642 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
BMP4-208ENST00000559642 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
BMP4-208ENST00000559642 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
BMP4-208ENST00000559642 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
BMP4-208ENST00000559642 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
BMP4-208ENST00000559642 SOGA1O94964 1423 aa22.82■■□□□ 1.24
BMP4-208ENST00000559642 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.244e-8■■■■□ 26.6
BMP4-208ENST00000559642 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
BMP4-208ENST00000559642 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
BMP4-208ENST00000559642 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
BMP4-208ENST00000559642 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
BMP4-208ENST00000559642 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
BMP4-208ENST00000559642 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
BMP4-208ENST00000559642 CHD1O14646 1710 aa22.69■■□□□ 1.22
BMP4-208ENST00000559642 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
BMP4-208ENST00000559642 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
BMP4-208ENST00000559642 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
BMP4-208ENST00000559642 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
BMP4-208ENST00000559642 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
BMP4-208ENST00000559642 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
BMP4-208ENST00000559642 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
BMP4-208ENST00000559642 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
BMP4-208ENST00000559642 FBLN2P98095 1184 aa22.54■■□□□ 1.2
BMP4-208ENST00000559642 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
BMP4-208ENST00000559642 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
BMP4-208ENST00000559642 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
BMP4-208ENST00000559642 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
BMP4-208ENST00000559642 ADAMTS12P58397 1594 aa22.43■■□□□ 1.18
BMP4-208ENST00000559642 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
BMP4-208ENST00000559642 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
BMP4-208ENST00000559642 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
BMP4-208ENST00000559642 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
BMP4-208ENST00000559642 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
BMP4-208ENST00000559642 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
BMP4-208ENST00000559642 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
BMP4-208ENST00000559642 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
BMP4-208ENST00000559642 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
BMP4-208ENST00000559642 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
BMP4-208ENST00000559642 NUP160Q12769 1436 aa22.22■■□□□ 1.15
BMP4-208ENST00000559642 CUL7Q14999 1698 aa22.18■■□□□ 1.14
BMP4-208ENST00000559642 IGF1RP08069 1367 aa22.15■■□□□ 1.14
BMP4-208ENST00000559642 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
BMP4-208ENST00000559642 SHROOM2Q13796 1616 aa22.11■■□□□ 1.13
BMP4-208ENST00000559642 ERCC6L2Q5T890 1561 aa22.11■■□□□ 1.13
BMP4-208ENST00000559642 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
BMP4-208ENST00000559642 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms