RNA–Protein interactions for RNA: ENST00000509600.1

WDR1-213, Transcript of WD repeat domain 1, humanhuman

TSL 2

Gene WDR1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR1-213ENST00000509600 NISCHQ9Y2I1 1504 aa48.73■■■■■ 5.39
WDR1-213ENST00000509600 CCDC180Q9P1Z9 1646 aa43.49■■■■■ 4.55
WDR1-213ENST00000509600 ABCC9O60706 1549 aa43.22■■■■■ 4.51
WDR1-213ENST00000509600 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
WDR1-213ENST00000509600 NACADO15069 1562 aa41.14■■■■■ 4.18
WDR1-213ENST00000509600 DCAF8L2P0C7V8 631 aa41.08■■■■■ 4.17
WDR1-213ENST00000509600 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
WDR1-213ENST00000509600 ZCCHC6Q5VYS8 1495 aaKnown RBP40.43■■■■■ 4.06
WDR1-213ENST00000509600 PABPN1Q86U42 306 aaKnown RBP eCLIP40.37■■■■■ 4.05
WDR1-213ENST00000509600 DCAF1Q9Y4B6 1507 aa40.31■■■■■ 4.04
WDR1-213ENST00000509600 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
WDR1-213ENST00000509600 UNC13AQ9UPW8 1703 aa40.18■■■■■ 4.02
WDR1-213ENST00000509600 BICRAQ9NZM4 1560 aa40.02■■■■■ 4
WDR1-213ENST00000509600 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
WDR1-213ENST00000509600 SCRIBQ14160 1630 aa39.64■■■■□ 3.94
WDR1-213ENST00000509600 EIF4G1Q04637 1599 aaKnown RBP39.06■■■■□ 3.84
WDR1-213ENST00000509600 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
WDR1-213ENST00000509600 CECR2Q9BXF3 1484 aa38.94■■■■□ 3.82
WDR1-213ENST00000509600 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
WDR1-213ENST00000509600 ATAD2BQ9ULI0 1458 aa37.9■■■■□ 3.66
WDR1-213ENST00000509600 SMARCA4P51532 1647 aa37.87■■■■□ 3.65
WDR1-213ENST00000509600 SMARCA2P51531 1590 aa37.82■■■■□ 3.65
WDR1-213ENST00000509600 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
WDR1-213ENST00000509600 HMGXB3Q12766 1538 aa37.69■■■■□ 3.62
WDR1-213ENST00000509600 PEG3Q9GZU2 1588 aa37.55■■■■□ 3.6
WDR1-213ENST00000509600 BAZ1BQ9UIG0 1483 aaKnown RBP37.55■■■■□ 3.6
WDR1-213ENST00000509600 MROH2BQ7Z745 1585 aa37.51■■■■□ 3.59
WDR1-213ENST00000509600 ERCC6Q03468 1493 aa37.35■■■■□ 3.57
WDR1-213ENST00000509600 NESP48681 1621 aa37.2■■■■□ 3.55
WDR1-213ENST00000509600 CUX2O14529 1486 aa37.18■■■■□ 3.54
WDR1-213ENST00000509600 LAMC3Q9Y6N6 1575 aa37.04■■■■□ 3.52
WDR1-213ENST00000509600 WIZO95785 1651 aa37.02■■■■□ 3.52
WDR1-213ENST00000509600 RSF1Q96T23 1441 aaPredicted RBP36.92■■■■□ 3.5
WDR1-213ENST00000509600 PDS5BQ9NTI5 1447 aa36.91■■■■□ 3.5
WDR1-213ENST00000509600 CADPSQ9ULU8 1353 aa36.89■■■■□ 3.5
WDR1-213ENST00000509600 DNAJC5Q9H3Z4 198 aa36.83■■■■□ 3.49
WDR1-213ENST00000509600 THOC2Q8NI27 1593 aaKnown RBP36.71■■■■□ 3.47
WDR1-213ENST00000509600 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
WDR1-213ENST00000509600 KIF21AQ7Z4S6 1674 aa36.64■■■■□ 3.46
WDR1-213ENST00000509600 CFTRP13569 1480 aa36.5■■■■□ 3.43
WDR1-213ENST00000509600 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
WDR1-213ENST00000509600 FANCD2Q9BXW9 1451 aa36.42■■■■□ 3.42
WDR1-213ENST00000509600 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
WDR1-213ENST00000509600 WDR62O43379 1518 aa36.36■■■■□ 3.41
WDR1-213ENST00000509600 CCDC88BA6NC98 1476 aa36.26■■■■□ 3.4
WDR1-213ENST00000509600 URB2Q14146 1524 aaKnown RBP36.05■■■■□ 3.36
WDR1-213ENST00000509600 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
WDR1-213ENST00000509600 ABCC8Q09428 1581 aa35.78■■■■□ 3.32
WDR1-213ENST00000509600 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
WDR1-213ENST00000509600 IFT140Q96RY7 1462 aa35.72■■■■□ 3.31
WDR1-213ENST00000509600 OSCARQ8IYS5 282 aa35.63■■■■□ 3.29
WDR1-213ENST00000509600 DNMBPQ6XZF7 1577 aa35.62■■■■□ 3.29
WDR1-213ENST00000509600 SUPT5HO00267 1087 aaKnown RBP35.58■■■■□ 3.29
WDR1-213ENST00000509600 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
WDR1-213ENST00000509600 POLA1P09884 1462 aaPredicted RBP35.4■■■■□ 3.26
WDR1-213ENST00000509600 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
WDR1-213ENST00000509600 AQRO60306 1485 aaKnown RBP eCLIP35.32■■■■□ 3.242e-9■■■■■ 33.6
WDR1-213ENST00000509600 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
WDR1-213ENST00000509600 SOGA1O94964 1423 aa35.32■■■■□ 3.24
WDR1-213ENST00000509600 TRIM41Q8WV44 630 aa35.31■■■■□ 3.24
WDR1-213ENST00000509600 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.23
WDR1-213ENST00000509600 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
WDR1-213ENST00000509600 CUX1P39880 1505 aa35.22■■■■□ 3.23
WDR1-213ENST00000509600 TDRD9Q8NDG6 1382 aaKnown RBP35.17■■■■□ 3.22
WDR1-213ENST00000509600 FBLN2P98095 1184 aa35.09■■■■□ 3.21
WDR1-213ENST00000509600 WDR97A6NE52 1622 aa35.08■■■■□ 3.21
WDR1-213ENST00000509600 GRIN2BQ13224 1484 aa34.95■■■■□ 3.19
WDR1-213ENST00000509600 SNAPC4Q5SXM2 1469 aa34.94■■■■□ 3.18
WDR1-213ENST00000509600 CHD1O14646 1710 aa34.93■■■■□ 3.18
WDR1-213ENST00000509600 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
WDR1-213ENST00000509600 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
WDR1-213ENST00000509600 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
WDR1-213ENST00000509600 CHMP7Q8WUX9 453 aaPredicted RBP34.92■■■■□ 3.18
WDR1-213ENST00000509600 ARHGEF11O15085 1522 aa34.91■■■■□ 3.18
WDR1-213ENST00000509600 MAGI1Q96QZ7 1491 aaPredicted RBP34.9■■■■□ 3.18
WDR1-213ENST00000509600 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
WDR1-213ENST00000509600 GAPVD1Q14C86 1478 aa34.86■■■■□ 3.17
WDR1-213ENST00000509600 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
WDR1-213ENST00000509600 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
WDR1-213ENST00000509600 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
WDR1-213ENST00000509600 CYB5RLQ6IPT4 315 aa34.74■■■■□ 3.15
WDR1-213ENST00000509600 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.15
WDR1-213ENST00000509600 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
WDR1-213ENST00000509600 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
WDR1-213ENST00000509600 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
WDR1-213ENST00000509600 CLASP1Q7Z460 1538 aa34.64■■■■□ 3.14
WDR1-213ENST00000509600 ARAP1Q96P48 1450 aa34.58■■■■□ 3.13
WDR1-213ENST00000509600 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
WDR1-213ENST00000509600 FHAD1B1AJZ9 1412 aa34.46■■■■□ 3.11
WDR1-213ENST00000509600 ERICH3Q5RHP9 1530 aa34.44■■■■□ 3.1
WDR1-213ENST00000509600 ADAMTS12P58397 1594 aa34.42■■■■□ 3.1
WDR1-213ENST00000509600 NUP160Q12769 1436 aa34.35■■■■□ 3.09
WDR1-213ENST00000509600 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
WDR1-213ENST00000509600 TRHP20396 242 aaPredicted RBP34.25■■■■□ 3.07
WDR1-213ENST00000509600 KIF27Q86VH2 1401 aa34.19■■■■□ 3.06
WDR1-213ENST00000509600 IGF1RP08069 1367 aa34.14■■■■□ 3.06
WDR1-213ENST00000509600 JPH4Q96JJ6 628 aa34.09■■■■□ 3.05
WDR1-213ENST00000509600 SHROOM2Q13796 1616 aa34.08■■■■□ 3.05
WDR1-213ENST00000509600 ERCC6L2Q5T890 1561 aa34.07■■■■□ 3.05
WDR1-213ENST00000509600 PRG4Q92954 1404 aaPredicted RBP34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms