RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
PRPF38B-204ENST00000467302 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
PRPF38B-204ENST00000467302 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
PRPF38B-204ENST00000467302 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
PRPF38B-204ENST00000467302 SHROOM4Q9ULL8 1493 aa26.1■■□□□ 1.77
PRPF38B-204ENST00000467302 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
PRPF38B-204ENST00000467302 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
PRPF38B-204ENST00000467302 ABCC9O60706 1549 aa25.73■■□□□ 1.71
PRPF38B-204ENST00000467302 NACADO15069 1562 aa25.6■■□□□ 1.69
PRPF38B-204ENST00000467302 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
PRPF38B-204ENST00000467302 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
PRPF38B-204ENST00000467302 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
PRPF38B-204ENST00000467302 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
PRPF38B-204ENST00000467302 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
PRPF38B-204ENST00000467302 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
PRPF38B-204ENST00000467302 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
PRPF38B-204ENST00000467302 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
PRPF38B-204ENST00000467302 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
PRPF38B-204ENST00000467302 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
PRPF38B-204ENST00000467302 WIZO95785 1651 aa24.39■■□□□ 1.5
PRPF38B-204ENST00000467302 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
PRPF38B-204ENST00000467302 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
PRPF38B-204ENST00000467302 HRCP23327 699 aa24.27■■□□□ 1.48
PRPF38B-204ENST00000467302 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
PRPF38B-204ENST00000467302 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
PRPF38B-204ENST00000467302 PCGF6Q9BYE7 350 aa24.06■■□□□ 1.44
PRPF38B-204ENST00000467302 LOC105371045A0A1W2PR82 267 aa23.97■■□□□ 1.43
PRPF38B-204ENST00000467302 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
PRPF38B-204ENST00000467302 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
PRPF38B-204ENST00000467302 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
PRPF38B-204ENST00000467302 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
PRPF38B-204ENST00000467302 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
PRPF38B-204ENST00000467302 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
PRPF38B-204ENST00000467302 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
PRPF38B-204ENST00000467302 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.38
PRPF38B-204ENST00000467302 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
PRPF38B-204ENST00000467302 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
PRPF38B-204ENST00000467302 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
PRPF38B-204ENST00000467302 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
PRPF38B-204ENST00000467302 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
PRPF38B-204ENST00000467302 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
PRPF38B-204ENST00000467302 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
PRPF38B-204ENST00000467302 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
PRPF38B-204ENST00000467302 EEA1Q15075 1411 aa23.18■■□□□ 1.3
PRPF38B-204ENST00000467302 CFTRP13569 1480 aa23.17■■□□□ 1.3
PRPF38B-204ENST00000467302 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
PRPF38B-204ENST00000467302 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
PRPF38B-204ENST00000467302 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
PRPF38B-204ENST00000467302 SOGA1O94964 1423 aa23.1■■□□□ 1.29
PRPF38B-204ENST00000467302 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
PRPF38B-204ENST00000467302 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
PRPF38B-204ENST00000467302 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
PRPF38B-204ENST00000467302 CUX1P39880 1505 aa22.95■■□□□ 1.26
PRPF38B-204ENST00000467302 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
PRPF38B-204ENST00000467302 KIF21BO75037 1637 aa22.88■■□□□ 1.25
PRPF38B-204ENST00000467302 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
PRPF38B-204ENST00000467302 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
PRPF38B-204ENST00000467302 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
PRPF38B-204ENST00000467302 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
PRPF38B-204ENST00000467302 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
PRPF38B-204ENST00000467302 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
PRPF38B-204ENST00000467302 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
PRPF38B-204ENST00000467302 NESP48681 1621 aa22.7■■□□□ 1.22
PRPF38B-204ENST00000467302 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
PRPF38B-204ENST00000467302 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
PRPF38B-204ENST00000467302 ERICH3Q5RHP9 1530 aa22.66■■□□□ 1.22
PRPF38B-204ENST00000467302 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.22
PRPF38B-204ENST00000467302 RAPGEF2Q9Y4G8 1499 aa22.64■■□□□ 1.21
PRPF38B-204ENST00000467302 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
PRPF38B-204ENST00000467302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
PRPF38B-204ENST00000467302 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
PRPF38B-204ENST00000467302 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
PRPF38B-204ENST00000467302 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
PRPF38B-204ENST00000467302 CUX2O14529 1486 aa22.55■■□□□ 1.2
PRPF38B-204ENST00000467302 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
PRPF38B-204ENST00000467302 CLIP1P30622 1438 aa22.49■■□□□ 1.19
PRPF38B-204ENST00000467302 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
PRPF38B-204ENST00000467302 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
PRPF38B-204ENST00000467302 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
PRPF38B-204ENST00000467302 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
PRPF38B-204ENST00000467302 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
PRPF38B-204ENST00000467302 IGF1RP08069 1367 aa22.41■■□□□ 1.18
PRPF38B-204ENST00000467302 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
PRPF38B-204ENST00000467302 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
PRPF38B-204ENST00000467302 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
PRPF38B-204ENST00000467302 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
PRPF38B-204ENST00000467302 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
PRPF38B-204ENST00000467302 CUL7Q14999 1698 aa22.31■■□□□ 1.16
PRPF38B-204ENST00000467302 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
PRPF38B-204ENST00000467302 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
PRPF38B-204ENST00000467302 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
PRPF38B-204ENST00000467302 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
PRPF38B-204ENST00000467302 DIEXFQ68CQ4 756 aaKnown RBP22.23■■□□□ 1.15
PRPF38B-204ENST00000467302 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
PRPF38B-204ENST00000467302 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
PRPF38B-204ENST00000467302 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
PRPF38B-204ENST00000467302 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
PRPF38B-204ENST00000467302 WDR62O43379 1518 aa22.16■■□□□ 1.14
PRPF38B-204ENST00000467302 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
PRPF38B-204ENST00000467302 APLP2Q06481 763 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms