RNA–Protein interactions for RNA: ENST00000400345.7

NEDD4L-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-205ENST00000400345 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
NEDD4L-205ENST00000400345 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
NEDD4L-205ENST00000400345 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
NEDD4L-205ENST00000400345 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
NEDD4L-205ENST00000400345 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
NEDD4L-205ENST00000400345 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
NEDD4L-205ENST00000400345 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
NEDD4L-205ENST00000400345 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
NEDD4L-205ENST00000400345 HRCP23327 699 aa23.89■■□□□ 1.41
NEDD4L-205ENST00000400345 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
NEDD4L-205ENST00000400345 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
NEDD4L-205ENST00000400345 ABCC9O60706 1549 aa23.48■■□□□ 1.35
NEDD4L-205ENST00000400345 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
NEDD4L-205ENST00000400345 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
NEDD4L-205ENST00000400345 TTBK1Q5TCY1 1321 aaPredicted RBP23.43■■□□□ 1.34
NEDD4L-205ENST00000400345 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
NEDD4L-205ENST00000400345 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
NEDD4L-205ENST00000400345 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
NEDD4L-205ENST00000400345 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.271e-13■■□□□ 13
NEDD4L-205ENST00000400345 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
NEDD4L-205ENST00000400345 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
NEDD4L-205ENST00000400345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.79■■□□□ 1.24
NEDD4L-205ENST00000400345 ZEB1P37275 1124 aaPredicted RBP22.77■■□□□ 1.24
NEDD4L-205ENST00000400345 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
NEDD4L-205ENST00000400345 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
NEDD4L-205ENST00000400345 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
NEDD4L-205ENST00000400345 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.19
NEDD4L-205ENST00000400345 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
NEDD4L-205ENST00000400345 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
NEDD4L-205ENST00000400345 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
NEDD4L-205ENST00000400345 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.17
NEDD4L-205ENST00000400345 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-205ENST00000400345 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
NEDD4L-205ENST00000400345 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
NEDD4L-205ENST00000400345 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
NEDD4L-205ENST00000400345 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
NEDD4L-205ENST00000400345 APLP2Q06481 763 aa22.16■■□□□ 1.14
NEDD4L-205ENST00000400345 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
NEDD4L-205ENST00000400345 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
NEDD4L-205ENST00000400345 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
NEDD4L-205ENST00000400345 NACADO15069 1562 aa21.98■■□□□ 1.11
NEDD4L-205ENST00000400345 ITGAEP38570 1179 aa21.9■■□□□ 1.1
NEDD4L-205ENST00000400345 WIZO95785 1651 aa21.85■■□□□ 1.09
NEDD4L-205ENST00000400345 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
NEDD4L-205ENST00000400345 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
NEDD4L-205ENST00000400345 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.07
NEDD4L-205ENST00000400345 MIER1Q8N108 512 aa21.68■■□□□ 1.06
NEDD4L-205ENST00000400345 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
NEDD4L-205ENST00000400345 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
NEDD4L-205ENST00000400345 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
NEDD4L-205ENST00000400345 SOGA1O94964 1423 aa21.54■■□□□ 1.04
NEDD4L-205ENST00000400345 BCANQ96GW7 911 aa21.53■■□□□ 1.04
NEDD4L-205ENST00000400345 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
NEDD4L-205ENST00000400345 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
NEDD4L-205ENST00000400345 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
NEDD4L-205ENST00000400345 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
NEDD4L-205ENST00000400345 SMARCA4P51532 1647 aa21.3■■□□□ 1
NEDD4L-205ENST00000400345 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
NEDD4L-205ENST00000400345 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-205ENST00000400345 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-205ENST00000400345 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
NEDD4L-205ENST00000400345 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
NEDD4L-205ENST00000400345 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
NEDD4L-205ENST00000400345 MYT1Q01538 1121 aa21.19■□□□□ 0.98
NEDD4L-205ENST00000400345 CLIP1P30622 1438 aa21.18■□□□□ 0.98
NEDD4L-205ENST00000400345 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
NEDD4L-205ENST00000400345 NEFLP07196 543 aa21.15■□□□□ 0.98
NEDD4L-205ENST00000400345 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
NEDD4L-205ENST00000400345 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
NEDD4L-205ENST00000400345 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
NEDD4L-205ENST00000400345 DDX10Q13206 875 aaKnown RBP21.1■□□□□ 0.97
NEDD4L-205ENST00000400345 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
NEDD4L-205ENST00000400345 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
NEDD4L-205ENST00000400345 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
NEDD4L-205ENST00000400345 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
NEDD4L-205ENST00000400345 FKBP8Q14318 412 aa21.02■□□□□ 0.96
NEDD4L-205ENST00000400345 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
NEDD4L-205ENST00000400345 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
NEDD4L-205ENST00000400345 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
NEDD4L-205ENST00000400345 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
NEDD4L-205ENST00000400345 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
NEDD4L-205ENST00000400345 SIN3AQ96ST3 1273 aa20.9■□□□□ 0.94
NEDD4L-205ENST00000400345 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
NEDD4L-205ENST00000400345 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
NEDD4L-205ENST00000400345 EEA1Q15075 1411 aa20.85■□□□□ 0.93
NEDD4L-205ENST00000400345 FBLN2P98095 1184 aa20.83■□□□□ 0.93
NEDD4L-205ENST00000400345 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
NEDD4L-205ENST00000400345 ANP32CO43423 234 aa20.79■□□□□ 0.92
NEDD4L-205ENST00000400345 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
NEDD4L-205ENST00000400345 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
NEDD4L-205ENST00000400345 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
NEDD4L-205ENST00000400345 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
NEDD4L-205ENST00000400345 CUX2O14529 1486 aa20.7■□□□□ 0.91
NEDD4L-205ENST00000400345 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
NEDD4L-205ENST00000400345 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
NEDD4L-205ENST00000400345 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■■□ 20.4
NEDD4L-205ENST00000400345 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-205ENST00000400345 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
NEDD4L-205ENST00000400345 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
NEDD4L-205ENST00000400345 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 783 ms