RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NISCHQ9Y2I1 1504 aa37.06■■■■□ 3.52
PRPF38B-202ENST00000370022 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
PRPF38B-202ENST00000370022 ABCC9O60706 1549 aa31.68■■■□□ 2.66
PRPF38B-202ENST00000370022 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.55
PRPF38B-202ENST00000370022 NACADO15069 1562 aa30.77■■■□□ 2.52
PRPF38B-202ENST00000370022 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.52
PRPF38B-202ENST00000370022 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
PRPF38B-202ENST00000370022 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
PRPF38B-202ENST00000370022 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.5
PRPF38B-202ENST00000370022 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
PRPF38B-202ENST00000370022 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
PRPF38B-202ENST00000370022 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.34
PRPF38B-202ENST00000370022 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
PRPF38B-202ENST00000370022 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
PRPF38B-202ENST00000370022 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
PRPF38B-202ENST00000370022 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
PRPF38B-202ENST00000370022 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
PRPF38B-202ENST00000370022 BAZ1AQ9NRL2 1556 aaPredicted RBP28.72■■■□□ 2.19
PRPF38B-202ENST00000370022 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
PRPF38B-202ENST00000370022 SMARCA4P51532 1647 aa28.66■■■□□ 2.18
PRPF38B-202ENST00000370022 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
PRPF38B-202ENST00000370022 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
PRPF38B-202ENST00000370022 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
PRPF38B-202ENST00000370022 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
PRPF38B-202ENST00000370022 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
PRPF38B-202ENST00000370022 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
PRPF38B-202ENST00000370022 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
PRPF38B-202ENST00000370022 WIZO95785 1651 aa28.22■■■□□ 2.11
PRPF38B-202ENST00000370022 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
PRPF38B-202ENST00000370022 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
PRPF38B-202ENST00000370022 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
PRPF38B-202ENST00000370022 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
PRPF38B-202ENST00000370022 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
PRPF38B-202ENST00000370022 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
PRPF38B-202ENST00000370022 NESP48681 1621 aa27.5■■□□□ 1.99
PRPF38B-202ENST00000370022 CFTRP13569 1480 aa27.49■■□□□ 1.99
PRPF38B-202ENST00000370022 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
PRPF38B-202ENST00000370022 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
PRPF38B-202ENST00000370022 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
PRPF38B-202ENST00000370022 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
PRPF38B-202ENST00000370022 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
PRPF38B-202ENST00000370022 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
PRPF38B-202ENST00000370022 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
PRPF38B-202ENST00000370022 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
PRPF38B-202ENST00000370022 WDR62O43379 1518 aa26.96■■□□□ 1.91
PRPF38B-202ENST00000370022 CUX2O14529 1486 aa26.93■■□□□ 1.9
PRPF38B-202ENST00000370022 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
PRPF38B-202ENST00000370022 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
PRPF38B-202ENST00000370022 DNMBPQ6XZF7 1577 aa26.84■■□□□ 1.89
PRPF38B-202ENST00000370022 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
PRPF38B-202ENST00000370022 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
PRPF38B-202ENST00000370022 CUX1P39880 1505 aa26.75■■□□□ 1.87
PRPF38B-202ENST00000370022 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
PRPF38B-202ENST00000370022 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
PRPF38B-202ENST00000370022 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
PRPF38B-202ENST00000370022 SYNJ1O43426 1573 aa26.62■■□□□ 1.85
PRPF38B-202ENST00000370022 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
PRPF38B-202ENST00000370022 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
PRPF38B-202ENST00000370022 SOGA1O94964 1423 aa26.53■■□□□ 1.84
PRPF38B-202ENST00000370022 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
PRPF38B-202ENST00000370022 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
PRPF38B-202ENST00000370022 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
PRPF38B-202ENST00000370022 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
PRPF38B-202ENST00000370022 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
PRPF38B-202ENST00000370022 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
PRPF38B-202ENST00000370022 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
PRPF38B-202ENST00000370022 EIF4G3O43432 1585 aaKnown RBP26.32■■□□□ 1.8
PRPF38B-202ENST00000370022 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
PRPF38B-202ENST00000370022 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.81e-8■■■■■ 31.9
PRPF38B-202ENST00000370022 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
PRPF38B-202ENST00000370022 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
PRPF38B-202ENST00000370022 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
PRPF38B-202ENST00000370022 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
PRPF38B-202ENST00000370022 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
PRPF38B-202ENST00000370022 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
PRPF38B-202ENST00000370022 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
PRPF38B-202ENST00000370022 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
PRPF38B-202ENST00000370022 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
PRPF38B-202ENST00000370022 IGF1RP08069 1367 aa26■■□□□ 1.75
PRPF38B-202ENST00000370022 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
PRPF38B-202ENST00000370022 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
PRPF38B-202ENST00000370022 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
PRPF38B-202ENST00000370022 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
PRPF38B-202ENST00000370022 EEA1Q15075 1411 aa25.95■■□□□ 1.75
PRPF38B-202ENST00000370022 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
PRPF38B-202ENST00000370022 CUL7Q14999 1698 aa25.93■■□□□ 1.74
PRPF38B-202ENST00000370022 FBLN2P98095 1184 aa25.91■■□□□ 1.74
PRPF38B-202ENST00000370022 CHD1O14646 1710 aa25.88■■□□□ 1.73
PRPF38B-202ENST00000370022 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
PRPF38B-202ENST00000370022 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
PRPF38B-202ENST00000370022 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
PRPF38B-202ENST00000370022 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
PRPF38B-202ENST00000370022 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
PRPF38B-202ENST00000370022 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
PRPF38B-202ENST00000370022 FAM9AQ8IZU1 332 aaPredicted RBP25.73■■□□□ 1.71
PRPF38B-202ENST00000370022 NUP160Q12769 1436 aa25.73■■□□□ 1.71
PRPF38B-202ENST00000370022 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
PRPF38B-202ENST00000370022 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
PRPF38B-202ENST00000370022 KIF21BO75037 1637 aa25.6■■□□□ 1.69
PRPF38B-202ENST00000370022 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms