RNA–Protein interactions for RNA: ENST00000495178.1

ATXN1-209, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-209ENST00000495178 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
ATXN1-209ENST00000495178 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
ATXN1-209ENST00000495178 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
ATXN1-209ENST00000495178 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
ATXN1-209ENST00000495178 FOXD1Q16676 465 aa19.91■□□□□ 0.78
ATXN1-209ENST00000495178 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
ATXN1-209ENST00000495178 MSH5O43196 834 aa18.71■□□□□ 0.59
ATXN1-209ENST00000495178 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
ATXN1-209ENST00000495178 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
ATXN1-209ENST00000495178 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
ATXN1-209ENST00000495178 ADRA2BP18089 450 aa18.13■□□□□ 0.49
ATXN1-209ENST00000495178 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
ATXN1-209ENST00000495178 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
ATXN1-209ENST00000495178 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
ATXN1-209ENST00000495178 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
ATXN1-209ENST00000495178 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
ATXN1-209ENST00000495178 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
ATXN1-209ENST00000495178 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
ATXN1-209ENST00000495178 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
ATXN1-209ENST00000495178 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
ATXN1-209ENST00000495178 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
ATXN1-209ENST00000495178 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
ATXN1-209ENST00000495178 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
ATXN1-209ENST00000495178 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
ATXN1-209ENST00000495178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATXN1-209ENST00000495178 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
ATXN1-209ENST00000495178 POTEHQ6S545 545 aa15□□□□□ -0.01
ATXN1-209ENST00000495178 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
ATXN1-209ENST00000495178 DSG3P32926 999 aa14.8□□□□□ -0.04
ATXN1-209ENST00000495178 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
ATXN1-209ENST00000495178 CAPN15O75808 1086 aa14.74□□□□□ -0.05
ATXN1-209ENST00000495178 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
ATXN1-209ENST00000495178 KCNA4P22459 653 aa14.52□□□□□ -0.09
ATXN1-209ENST00000495178 APLP2Q06481 763 aa14.47□□□□□ -0.09
ATXN1-209ENST00000495178 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
ATXN1-209ENST00000495178 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
ATXN1-209ENST00000495178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
ATXN1-209ENST00000495178 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
ATXN1-209ENST00000495178 ABCB7O75027 752 aa14.35□□□□□ -0.11
ATXN1-209ENST00000495178 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
ATXN1-209ENST00000495178 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
ATXN1-209ENST00000495178 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
ATXN1-209ENST00000495178 CHRDL2Q6WN34 429 aa14□□□□□ -0.17
ATXN1-209ENST00000495178 POLA2Q14181 598 aa13.98□□□□□ -0.17
ATXN1-209ENST00000495178 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
ATXN1-209ENST00000495178 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
ATXN1-209ENST00000495178 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
ATXN1-209ENST00000495178 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
ATXN1-209ENST00000495178 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
ATXN1-209ENST00000495178 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
ATXN1-209ENST00000495178 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
ATXN1-209ENST00000495178 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
ATXN1-209ENST00000495178 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
ATXN1-209ENST00000495178 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
ATXN1-209ENST00000495178 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
ATXN1-209ENST00000495178 EVX2Q03828 476 aa13.38□□□□□ -0.27
ATXN1-209ENST00000495178 HAX1O00165 279 aa13.37□□□□□ -0.27
ATXN1-209ENST00000495178 ZBTB22O15209 634 aa13.34□□□□□ -0.27
ATXN1-209ENST00000495178 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
ATXN1-209ENST00000495178 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
ATXN1-209ENST00000495178 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
ATXN1-209ENST00000495178 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
ATXN1-209ENST00000495178 FBLN2P98095 1184 aa13.21□□□□□ -0.29
ATXN1-209ENST00000495178 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
ATXN1-209ENST00000495178 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
ATXN1-209ENST00000495178 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
ATXN1-209ENST00000495178 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
ATXN1-209ENST00000495178 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
ATXN1-209ENST00000495178 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
ATXN1-209ENST00000495178 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
ATXN1-209ENST00000495178 GABBR2O75899 941 aa12.93□□□□□ -0.34
ATXN1-209ENST00000495178 LHX8Q68G74 356 aa12.9□□□□□ -0.34
ATXN1-209ENST00000495178 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
ATXN1-209ENST00000495178 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
ATXN1-209ENST00000495178 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
ATXN1-209ENST00000495178 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
ATXN1-209ENST00000495178 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
ATXN1-209ENST00000495178 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
ATXN1-209ENST00000495178 CLCN6P51797 869 aa12.6□□□□□ -0.39
ATXN1-209ENST00000495178 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
ATXN1-209ENST00000495178 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
ATXN1-209ENST00000495178 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
ATXN1-209ENST00000495178 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
ATXN1-209ENST00000495178 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
ATXN1-209ENST00000495178 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
ATXN1-209ENST00000495178 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
ATXN1-209ENST00000495178 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
ATXN1-209ENST00000495178 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
ATXN1-209ENST00000495178 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
ATXN1-209ENST00000495178 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
ATXN1-209ENST00000495178 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
ATXN1-209ENST00000495178 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATXN1-209ENST00000495178 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
ATXN1-209ENST00000495178 POTEMA6NI47 508 aa12.18□□□□□ -0.46
ATXN1-209ENST00000495178 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
ATXN1-209ENST00000495178 MNX1P50219 401 aaPredicted RBP12.15□□□□□ -0.46
ATXN1-209ENST00000495178 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
ATXN1-209ENST00000495178 POTEJP0CG39 1038 aa12.09□□□□□ -0.47
ATXN1-209ENST00000495178 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
ATXN1-209ENST00000495178 LCE2DQ5TA82 110 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms