RNA–Protein interactions for RNA: ENST00000374152.7

ARID1A-202, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-202ENST00000374152 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
ARID1A-202ENST00000374152 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
ARID1A-202ENST00000374152 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
ARID1A-202ENST00000374152 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
ARID1A-202ENST00000374152 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
ARID1A-202ENST00000374152 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
ARID1A-202ENST00000374152 APLP2Q06481 763 aa14.72□□□□□ -0.05
ARID1A-202ENST00000374152 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
ARID1A-202ENST00000374152 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
ARID1A-202ENST00000374152 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
ARID1A-202ENST00000374152 ATP1B4Q9UN42 357 aaPredicted RBP14.47□□□□□ -0.09
ARID1A-202ENST00000374152 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
ARID1A-202ENST00000374152 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
ARID1A-202ENST00000374152 ABCC9O60706 1549 aa14.21□□□□□ -0.13
ARID1A-202ENST00000374152 PPARGC1BQ86YN6 1023 aaKnown RBP14.17□□□□□ -0.14
ARID1A-202ENST00000374152 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
ARID1A-202ENST00000374152 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
ARID1A-202ENST00000374152 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
ARID1A-202ENST00000374152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
ARID1A-202ENST00000374152 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
ARID1A-202ENST00000374152 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
ARID1A-202ENST00000374152 ZEB1P37275 1124 aaPredicted RBP13.92□□□□□ -0.18
ARID1A-202ENST00000374152 ITGAEP38570 1179 aa13.92□□□□□ -0.18
ARID1A-202ENST00000374152 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
ARID1A-202ENST00000374152 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
ARID1A-202ENST00000374152 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
ARID1A-202ENST00000374152 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
ARID1A-202ENST00000374152 CENPBP07199 599 aaPredicted RBP13.76□□□□□ -0.21
ARID1A-202ENST00000374152 ERICH6Q7L0X2 663 aa13.74□□□□□ -0.21
ARID1A-202ENST00000374152 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
ARID1A-202ENST00000374152 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
ARID1A-202ENST00000374152 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ARID1A-202ENST00000374152 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
ARID1A-202ENST00000374152 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
ARID1A-202ENST00000374152 NEFLP07196 543 aa13.56□□□□□ -0.24
ARID1A-202ENST00000374152 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
ARID1A-202ENST00000374152 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
ARID1A-202ENST00000374152 HRCP23327 699 aa13.46□□□□□ -0.25
ARID1A-202ENST00000374152 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
ARID1A-202ENST00000374152 MYT1Q01538 1121 aa13.46□□□□□ -0.25
ARID1A-202ENST00000374152 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
ARID1A-202ENST00000374152 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
ARID1A-202ENST00000374152 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
ARID1A-202ENST00000374152 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
ARID1A-202ENST00000374152 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
ARID1A-202ENST00000374152 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
ARID1A-202ENST00000374152 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
ARID1A-202ENST00000374152 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
ARID1A-202ENST00000374152 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
ARID1A-202ENST00000374152 BCANQ96GW7 911 aa13.17□□□□□ -0.3
ARID1A-202ENST00000374152 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
ARID1A-202ENST00000374152 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
ARID1A-202ENST00000374152 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
ARID1A-202ENST00000374152 NACADO15069 1562 aa13.04□□□□□ -0.32
ARID1A-202ENST00000374152 ANP32CO43423 234 aa13.03□□□□□ -0.32
ARID1A-202ENST00000374152 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
ARID1A-202ENST00000374152 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
ARID1A-202ENST00000374152 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
ARID1A-202ENST00000374152 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
ARID1A-202ENST00000374152 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
ARID1A-202ENST00000374152 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
ARID1A-202ENST00000374152 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
ARID1A-202ENST00000374152 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
ARID1A-202ENST00000374152 RSF1Q96T23 1441 aaPredicted RBP12.97□□□□□ -0.33
ARID1A-202ENST00000374152 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.34
ARID1A-202ENST00000374152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.34
ARID1A-202ENST00000374152 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
ARID1A-202ENST00000374152 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
ARID1A-202ENST00000374152 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
ARID1A-202ENST00000374152 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
ARID1A-202ENST00000374152 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
ARID1A-202ENST00000374152 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
ARID1A-202ENST00000374152 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
ARID1A-202ENST00000374152 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
ARID1A-202ENST00000374152 CLIP1P30622 1438 aa12.85□□□□□ -0.35
ARID1A-202ENST00000374152 NEFMP07197 916 aa12.84□□□□□ -0.35
ARID1A-202ENST00000374152 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
ARID1A-202ENST00000374152 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
ARID1A-202ENST00000374152 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
ARID1A-202ENST00000374152 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
ARID1A-202ENST00000374152 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
ARID1A-202ENST00000374152 TSPY4P0CV99 314 aa12.81□□□□□ -0.36
ARID1A-202ENST00000374152 TSPY10P0CW01 314 aa12.81□□□□□ -0.36
ARID1A-202ENST00000374152 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
ARID1A-202ENST00000374152 GOLGA3Q08378 1498 aa12.79□□□□□ -0.36
ARID1A-202ENST00000374152 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
ARID1A-202ENST00000374152 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
ARID1A-202ENST00000374152 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
ARID1A-202ENST00000374152 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
ARID1A-202ENST00000374152 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
ARID1A-202ENST00000374152 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
ARID1A-202ENST00000374152 PLEKHD1A6NEE1 506 aa12.72□□□□□ -0.37
ARID1A-202ENST00000374152 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
ARID1A-202ENST00000374152 RTL5Q5HYW3 569 aaPredicted RBP12.7□□□□□ -0.38
ARID1A-202ENST00000374152 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
ARID1A-202ENST00000374152 EEA1Q15075 1411 aa12.7□□□□□ -0.38
ARID1A-202ENST00000374152 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
ARID1A-202ENST00000374152 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
ARID1A-202ENST00000374152 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
ARID1A-202ENST00000374152 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms