Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC8.94□□□□□ -0.982e-6■□□□□ 10.4
XRN2Q9H0D6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.233e-6■□□□□ 10.4
XRN2Q9H0D6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.253e-6■□□□□ 10.4
XRN2Q9H0D6 SAFB-212ENST00000592396 620 ntTSL 47.15□□□□□ -1.267e-11■□□□□ 10.4
XRN2Q9H0D6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.313e-6■□□□□ 10.4
XRN2Q9H0D6 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.85□□□□□ -1.312e-6■□□□□ 10.4
XRN2Q9H0D6 RTN4-214ENST00000486085 955 ntTSL 36.51□□□□□ -1.373e-6■□□□□ 10.4
XRN2Q9H0D6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.412e-6■□□□□ 10.4
XRN2Q9H0D6 AMD1-205ENST00000451850 3121 ntTSL 1 (best)6.14□□□□□ -1.432e-6■□□□□ 10.4
XRN2Q9H0D6 TGFBR1-204ENST00000547314 533 ntTSL 44.6□□□□□ -1.673e-6■□□□□ 10.4
XRN2Q9H0D6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.793e-6■□□□□ 10.4
XRN2Q9H0D6 TGFBR1-210ENST00000552573 526 ntTSL 42.16□□□□□ -2.063e-6■□□□□ 10.4
XRN2Q9H0D6 BAX-208ENST00000503726 488 ntTSL 219.14■□□□□ 0.656e-7■□□□□ 10.4
XRN2Q9H0D6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.4■■■□□ 2.942e-13■□□□□ 10.4
XRN2Q9H0D6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.75■■□□□ 1.872e-7■□□□□ 10.4
XRN2Q9H0D6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.412e-13■□□□□ 10.4
XRN2Q9H0D6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.99■■□□□ 1.272e-13■□□□□ 10.4
XRN2Q9H0D6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.15■□□□□ 0.52e-13■□□□□ 10.4
XRN2Q9H0D6 ITPA-206ENST00000461029 378 ntTSL 517.96■□□□□ 0.472e-13■□□□□ 10.4
XRN2Q9H0D6 AKAP1-217ENST00000576295 614 ntTSL 317.25■□□□□ 0.353e-7■□□□□ 10.4
XRN2Q9H0D6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.57■□□□□ 0.083e-7■□□□□ 10.4
XRN2Q9H0D6 EHBP1-217ENST00000472809 1374 ntTSL 510.88□□□□□ -0.672e-13■□□□□ 10.4
XRN2Q9H0D6 EHBP1-208ENST00000427809 581 ntTSL 46.24□□□□□ -1.412e-13■□□□□ 10.4
XRN2Q9H0D6 MICALL2-204ENST00000467394 2080 ntTSL 220.32■□□□□ 0.843e-7■□□□□ 10.4
XRN2Q9H0D6 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.73□□□□□ -0.692e-9■□□□□ 10.4
XRN2Q9H0D6 NUP214-216ENST00000526346 577 ntTSL 49.06□□□□□ -0.962e-9■□□□□ 10.4
XRN2Q9H0D6 NUP214-215ENST00000525980 2274 ntTSL 29.01□□□□□ -0.972e-9■□□□□ 10.4
XRN2Q9H0D6 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.082e-9■□□□□ 10.4
XRN2Q9H0D6 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.182e-9■□□□□ 10.4
XRN2Q9H0D6 NUP214-227ENST00000531929 593 ntTSL 42.18□□□□□ -2.062e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.14■■■□□ 2.426e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-207ENST00000414664 1070 ntTSL 529.51■■■□□ 2.316e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-212ENST00000430570 1332 ntTSL 528.92■■■□□ 2.226e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-217ENST00000439669 784 ntTSL 528.34■■■□□ 2.136e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-205ENST00000401607 1795 ntTSL 527.27■■□□□ 1.966e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-216ENST00000437340 1755 ntTSL 1 (best)26.85■■□□□ 1.896e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-220ENST00000458038 596 ntTSL 326.28■■□□□ 1.86e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-211ENST00000420363 821 ntTSL 225.22■■□□□ 1.636e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-219ENST00000440240 746 ntTSL 525.19■■□□□ 1.626e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.456e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 523.35■■□□□ 1.336e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-210ENST00000416778 744 ntTSL 221.42■■□□□ 1.026e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-213ENST00000434795 831 ntTSL 321.42■■□□□ 1.026e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-224ENST00000483359 1975 ntTSL 520.31■□□□□ 0.846e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-208ENST00000414711 673 ntTSL 520.24■□□□□ 0.836e-9■□□□□ 10.4
XRN2Q9H0D6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.826e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-215ENST00000437100 826 ntTSL 516.89■□□□□ 0.296e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-206ENST00000412056 998 ntTSL 316.09■□□□□ 0.176e-9■□□□□ 10.4
XRN2Q9H0D6 MLLT6-208ENST00000619356 3868 ntTSL 1 (best)14.85□□□□□ -0.032e-10■□□□□ 10.4
XRN2Q9H0D6 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 211.64□□□□□ -0.556e-9■□□□□ 10.4
XRN2Q9H0D6 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 211.64□□□□□ -0.556e-9■□□□□ 10.4
XRN2Q9H0D6 CPNE1-218ENST00000439806 748 ntTSL 510.6□□□□□ -0.716e-9■□□□□ 10.4
XRN2Q9H0D6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.56■□□□□ 0.721e-7■□□□□ 10.4
XRN2Q9H0D6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.021e-7■□□□□ 10.4
XRN2Q9H0D6 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.395e-6■□□□□ 10.4
XRN2Q9H0D6 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.685e-6■□□□□ 10.4
XRN2Q9H0D6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.06■□□□□ 0.322e-6■□□□□ 10.4
XRN2Q9H0D6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.142e-6■□□□□ 10.4
XRN2Q9H0D6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.142e-6■□□□□ 10.4
XRN2Q9H0D6 TRIM8-203ENST00000479004 547 ntTSL 224.43■■□□□ 1.56e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-206ENST00000485213 947 ntTSL 222.04■■□□□ 1.126e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-207ENST00000488216 835 ntTSL 319.68■□□□□ 0.746e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-204ENST00000466764 1375 ntTSL 319.42■□□□□ 0.76e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.596e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-205ENST00000472897 501 ntTSL 518.05■□□□□ 0.486e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-208ENST00000489344 724 ntTSL 217.35■□□□□ 0.376e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-209ENST00000490127 567 ntTSL 513.75□□□□□ -0.216e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC13.4□□□□□ -0.266e-12■□□□□ 10.4
XRN2Q9H0D6 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.336e-12■□□□□ 10.4
XRN2Q9H0D6 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)9.27□□□□□ -0.926e-23■□□□□ 10.4
XRN2Q9H0D6 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.936e-23■□□□□ 10.4
XRN2Q9H0D6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.37■□□□□ 0.852e-9■□□□□ 10.3
XRN2Q9H0D6 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-6■□□□□ 10.3
XRN2Q9H0D6 WDR26-208ENST00000486652 2867 ntTSL 1 (best)18.5■□□□□ 0.554e-9■□□□□ 10.3
XRN2Q9H0D6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.144e-9■□□□□ 10.3
XRN2Q9H0D6 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.448e-21■□□□□ 10.3
XRN2Q9H0D6 WDR26-202ENST00000443112 1306 ntTSL 1 (best)8.53□□□□□ -1.044e-9■□□□□ 10.3
XRN2Q9H0D6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.94■■■□□ 2.78e-7■□□□□ 10.3
XRN2Q9H0D6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.84■■■□□ 2.378e-7■□□□□ 10.3
XRN2Q9H0D6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.69■■■□□ 2.028e-7■□□□□ 10.3
XRN2Q9H0D6 PCYT2-218ENST00000576343 1006 ntTSL 527.57■■■□□ 28e-7■□□□□ 10.3
XRN2Q9H0D6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.528e-7■□□□□ 10.3
XRN2Q9H0D6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.98■■□□□ 1.278e-7■□□□□ 10.3
XRN2Q9H0D6 PROC-206ENST00000429925 581 ntTSL 316.57■□□□□ 0.245e-8■□□□□ 10.3
XRN2Q9H0D6 PROC-210ENST00000474030 501 ntTSL 412.59□□□□□ -0.395e-8■□□□□ 10.3
XRN2Q9H0D6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.59■■■□□ 2.171e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.651e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.35■■□□□ 1.171e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.171e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.84■■□□□ 1.091e-6■□□□□ 10.3
XRN2Q9H0D6 MICALL2-212ENST00000487187 764 ntTSL 521.4■■□□□ 1.021e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-202ENST00000382240 1991 ntTSL 220.85■□□□□ 0.931e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.881e-6■□□□□ 10.3
XRN2Q9H0D6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.4■□□□□ 0.71e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.87■□□□□ 0.451e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-203ENST00000525981 297 ntTSL 517.87■□□□□ 0.451e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-212ENST00000534599 651 ntTSL 515.35■□□□□ 0.051e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC11.3□□□□□ -0.61e-6■□□□□ 10.3
XRN2Q9H0D6 RPL27A-207ENST00000530585 577 ntTSL 210.17□□□□□ -0.781e-6■□□□□ 10.3
Retrieved 100 of 21,068 protein–RNA pairs in 100.5 ms