RNA–Protein interactions for RNA: ENST00000382240.9

PKMYT1-202, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2

Gene PKMYT1, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-202ENST00000382240 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
PKMYT1-202ENST00000382240 CCDC180Q9P1Z9 1646 aa38.24■■■■□ 3.71
PKMYT1-202ENST00000382240 ZCCHC6Q5VYS8 1495 aaKnown RBP37.52■■■■□ 3.6
PKMYT1-202ENST00000382240 SHROOM4Q9ULL8 1493 aa36.93■■■■□ 3.5
PKMYT1-202ENST00000382240 DCAF1Q9Y4B6 1507 aa36.72■■■■□ 3.47
PKMYT1-202ENST00000382240 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
PKMYT1-202ENST00000382240 MYO15BQ96JP2 1530 aa35.97■■■■□ 3.35
PKMYT1-202ENST00000382240 SUPT5HO00267 1087 aaKnown RBP35.96■■■■□ 3.35
PKMYT1-202ENST00000382240 ABCC9O60706 1549 aa35.52■■■■□ 3.28
PKMYT1-202ENST00000382240 NACADO15069 1562 aa35.46■■■■□ 3.27
PKMYT1-202ENST00000382240 SCRIBQ14160 1630 aa35.38■■■■□ 3.25
PKMYT1-202ENST00000382240 RB1CC1Q8TDY2 1594 aa34.94■■■■□ 3.18
PKMYT1-202ENST00000382240 CHIC1Q5VXU3 224 aa34.91■■■■□ 3.18
PKMYT1-202ENST00000382240 RSF1Q96T23 1441 aaPredicted RBP34.87■■■■□ 3.17
PKMYT1-202ENST00000382240 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
PKMYT1-202ENST00000382240 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
PKMYT1-202ENST00000382240 UNC13AQ9UPW8 1703 aa34.32■■■■□ 3.08
PKMYT1-202ENST00000382240 BAZ1AQ9NRL2 1556 aaPredicted RBP34.21■■■■□ 3.07
PKMYT1-202ENST00000382240 WIZO95785 1651 aa34.15■■■■□ 3.06
PKMYT1-202ENST00000382240 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
PKMYT1-202ENST00000382240 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
PKMYT1-202ENST00000382240 TOP2AP11388 1531 aaKnown RBP33.77■■■■□ 3
PKMYT1-202ENST00000382240 PABPN1Q86U42 306 aaKnown RBP eCLIP33.74■■■□□ 2.99
PKMYT1-202ENST00000382240 TRIM41Q8WV44 630 aa33.72■■■□□ 2.99
PKMYT1-202ENST00000382240 LOC105371045A0A1W2PR82 267 aa33.64■■■□□ 2.98
PKMYT1-202ENST00000382240 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
PKMYT1-202ENST00000382240 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
PKMYT1-202ENST00000382240 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
PKMYT1-202ENST00000382240 CCDC88BA6NC98 1476 aa33.52■■■□□ 2.96
PKMYT1-202ENST00000382240 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
PKMYT1-202ENST00000382240 FAM9AQ8IZU1 332 aaPredicted RBP33.16■■■□□ 2.9
PKMYT1-202ENST00000382240 ABCC8Q09428 1581 aa33.08■■■□□ 2.89
PKMYT1-202ENST00000382240 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
PKMYT1-202ENST00000382240 PCGF6Q9BYE7 350 aa32.98■■■□□ 2.87
PKMYT1-202ENST00000382240 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
PKMYT1-202ENST00000382240 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
PKMYT1-202ENST00000382240 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
PKMYT1-202ENST00000382240 HRCP23327 699 aa32.72■■■□□ 2.83
PKMYT1-202ENST00000382240 TRIM26Q12899 539 aaPredicted RBP32.72■■■□□ 2.83
PKMYT1-202ENST00000382240 EEA1Q15075 1411 aa32.7■■■□□ 2.83
PKMYT1-202ENST00000382240 SOGA1O94964 1423 aa32.68■■■□□ 2.82
PKMYT1-202ENST00000382240 EHMT2Q96KQ7 1210 aa32.67■■■□□ 2.82
PKMYT1-202ENST00000382240 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
PKMYT1-202ENST00000382240 RUSC2Q8N2Y8 1516 aa32.52■■■□□ 2.8
PKMYT1-202ENST00000382240 CSRNP3Q8WYN3 585 aa32.5■■■□□ 2.79
PKMYT1-202ENST00000382240 TNIKQ9UKE5 1360 aa32.41■■■□□ 2.78
PKMYT1-202ENST00000382240 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
PKMYT1-202ENST00000382240 CFTRP13569 1480 aa32.32■■■□□ 2.76
PKMYT1-202ENST00000382240 GOLGA3Q08378 1498 aa32.29■■■□□ 2.76
PKMYT1-202ENST00000382240 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
PKMYT1-202ENST00000382240 CEP162Q5TB80 1403 aa32.29■■■□□ 2.76
PKMYT1-202ENST00000382240 KIF21BO75037 1637 aa32.23■■■□□ 2.75
PKMYT1-202ENST00000382240 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
PKMYT1-202ENST00000382240 UBTFP17480 764 aaKnown RBP32.14■■■□□ 2.74
PKMYT1-202ENST00000382240 CC2D2AQ9P2K1 1620 aa32.14■■■□□ 2.74
PKMYT1-202ENST00000382240 CUX1P39880 1505 aa32.1■■■□□ 2.73
PKMYT1-202ENST00000382240 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
PKMYT1-202ENST00000382240 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
PKMYT1-202ENST00000382240 RAPGEF2Q9Y4G8 1499 aa31.96■■■□□ 2.71
PKMYT1-202ENST00000382240 PPARGC1BQ86YN6 1023 aaKnown RBP31.96■■■□□ 2.71
PKMYT1-202ENST00000382240 PRXQ9BXM0 1461 aa31.88■■■□□ 2.69
PKMYT1-202ENST00000382240 ERICH3Q5RHP9 1530 aa31.86■■■□□ 2.69
PKMYT1-202ENST00000382240 CLIP1P30622 1438 aa31.83■■■□□ 2.69
PKMYT1-202ENST00000382240 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
PKMYT1-202ENST00000382240 ZEB1P37275 1124 aaPredicted RBP31.81■■■□□ 2.68
PKMYT1-202ENST00000382240 VPS8Q8N3P4 1428 aa31.68■■■□□ 2.66
PKMYT1-202ENST00000382240 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
PKMYT1-202ENST00000382240 FGD5Q6ZNL6 1462 aa31.6■■■□□ 2.65
PKMYT1-202ENST00000382240 CUX2O14529 1486 aa31.56■■■□□ 2.64
PKMYT1-202ENST00000382240 IGF1RP08069 1367 aa31.54■■■□□ 2.64
PKMYT1-202ENST00000382240 NESP48681 1621 aa31.49■■■□□ 2.63
PKMYT1-202ENST00000382240 TTBK1Q5TCY1 1321 aaPredicted RBP31.49■■■□□ 2.63
PKMYT1-202ENST00000382240 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
PKMYT1-202ENST00000382240 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
PKMYT1-202ENST00000382240 ARAP1Q96P48 1450 aa31.43■■■□□ 2.62
PKMYT1-202ENST00000382240 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
PKMYT1-202ENST00000382240 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
PKMYT1-202ENST00000382240 CARMIL1Q5VZK9 1371 aa31.36■■■□□ 2.61
PKMYT1-202ENST00000382240 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
PKMYT1-202ENST00000382240 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
PKMYT1-202ENST00000382240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
PKMYT1-202ENST00000382240 APLP2Q06481 763 aa31.34■■■□□ 2.61
PKMYT1-202ENST00000382240 ARHGAP35Q9NRY4 1499 aa31.28■■■□□ 2.6
PKMYT1-202ENST00000382240 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
PKMYT1-202ENST00000382240 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
PKMYT1-202ENST00000382240 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
PKMYT1-202ENST00000382240 URB2Q14146 1524 aaKnown RBP31.23■■■□□ 2.59
PKMYT1-202ENST00000382240 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
PKMYT1-202ENST00000382240 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
PKMYT1-202ENST00000382240 CUL7Q14999 1698 aa31.08■■■□□ 2.57
PKMYT1-202ENST00000382240 KANK4Q5T7N3 995 aaPredicted RBP31.05■■■□□ 2.56
PKMYT1-202ENST00000382240 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
PKMYT1-202ENST00000382240 ABCA5Q8WWZ7 1642 aa30.99■■■□□ 2.55
PKMYT1-202ENST00000382240 MAP3K1Q13233 1512 aa30.97■■■□□ 2.55
PKMYT1-202ENST00000382240 HNRNPUL2Q1KMD3 747 aaKnown RBP30.97■■■□□ 2.55
PKMYT1-202ENST00000382240 RRBP1Q9P2E9 1410 aaKnown RBP30.91■■■□□ 2.54
PKMYT1-202ENST00000382240 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
PKMYT1-202ENST00000382240 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
PKMYT1-202ENST00000382240 FHAD1B1AJZ9 1412 aa30.87■■■□□ 2.53
PKMYT1-202ENST00000382240 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms