RNA–Protein interactions for RNA: ENST00000530585.5

RPL27A-207, Transcript of ribosomal protein L27a, humanhuman

TSL 2

Gene RPL27A, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-207ENST00000530585 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
RPL27A-207ENST00000530585 CCDC180Q9P1Z9 1646 aa18.83■□□□□ 0.61
RPL27A-207ENST00000530585 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
RPL27A-207ENST00000530585 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
RPL27A-207ENST00000530585 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
RPL27A-207ENST00000530585 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
RPL27A-207ENST00000530585 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
RPL27A-207ENST00000530585 ABCC9O60706 1549 aa17.54■□□□□ 0.4
RPL27A-207ENST00000530585 NACADO15069 1562 aa17.51■□□□□ 0.39
RPL27A-207ENST00000530585 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
RPL27A-207ENST00000530585 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
RPL27A-207ENST00000530585 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
RPL27A-207ENST00000530585 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
RPL27A-207ENST00000530585 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
RPL27A-207ENST00000530585 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
RPL27A-207ENST00000530585 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
RPL27A-207ENST00000530585 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
RPL27A-207ENST00000530585 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
RPL27A-207ENST00000530585 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
RPL27A-207ENST00000530585 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPL27A-207ENST00000530585 WIZO95785 1651 aa16.53■□□□□ 0.24
RPL27A-207ENST00000530585 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
RPL27A-207ENST00000530585 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
RPL27A-207ENST00000530585 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
RPL27A-207ENST00000530585 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
RPL27A-207ENST00000530585 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
RPL27A-207ENST00000530585 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
RPL27A-207ENST00000530585 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
RPL27A-207ENST00000530585 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
RPL27A-207ENST00000530585 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
RPL27A-207ENST00000530585 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
RPL27A-207ENST00000530585 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
RPL27A-207ENST00000530585 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
RPL27A-207ENST00000530585 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
RPL27A-207ENST00000530585 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
RPL27A-207ENST00000530585 CFTRP13569 1480 aa15.8■□□□□ 0.12
RPL27A-207ENST00000530585 EEA1Q15075 1411 aa15.8■□□□□ 0.12
RPL27A-207ENST00000530585 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
RPL27A-207ENST00000530585 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
RPL27A-207ENST00000530585 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
RPL27A-207ENST00000530585 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
RPL27A-207ENST00000530585 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
RPL27A-207ENST00000530585 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
RPL27A-207ENST00000530585 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
RPL27A-207ENST00000530585 SOGA1O94964 1423 aa15.64■□□□□ 0.09
RPL27A-207ENST00000530585 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
RPL27A-207ENST00000530585 CUX1P39880 1505 aa15.58■□□□□ 0.08
RPL27A-207ENST00000530585 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
RPL27A-207ENST00000530585 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
RPL27A-207ENST00000530585 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
RPL27A-207ENST00000530585 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
RPL27A-207ENST00000530585 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
RPL27A-207ENST00000530585 KIF21BO75037 1637 aa15.52■□□□□ 0.08
RPL27A-207ENST00000530585 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
RPL27A-207ENST00000530585 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
RPL27A-207ENST00000530585 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
RPL27A-207ENST00000530585 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
RPL27A-207ENST00000530585 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
RPL27A-207ENST00000530585 NESP48681 1621 aa15.43■□□□□ 0.06
RPL27A-207ENST00000530585 UBTFP17480 764 aaKnown RBP15.42■□□□□ 0.06
RPL27A-207ENST00000530585 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
RPL27A-207ENST00000530585 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
RPL27A-207ENST00000530585 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
RPL27A-207ENST00000530585 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
RPL27A-207ENST00000530585 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
RPL27A-207ENST00000530585 CUX2O14529 1486 aa15.34■□□□□ 0.05
RPL27A-207ENST00000530585 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
RPL27A-207ENST00000530585 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
RPL27A-207ENST00000530585 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
RPL27A-207ENST00000530585 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
RPL27A-207ENST00000530585 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
RPL27A-207ENST00000530585 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
RPL27A-207ENST00000530585 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
RPL27A-207ENST00000530585 IGF1RP08069 1367 aa15.27■□□□□ 0.04
RPL27A-207ENST00000530585 KIF21AQ7Z4S6 1674 aa15.27■□□□□ 0.03
RPL27A-207ENST00000530585 CLIP1P30622 1438 aa15.26■□□□□ 0.03
RPL27A-207ENST00000530585 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
RPL27A-207ENST00000530585 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.03
RPL27A-207ENST00000530585 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
RPL27A-207ENST00000530585 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
RPL27A-207ENST00000530585 CUL7Q14999 1698 aa15.19■□□□□ 0.02
RPL27A-207ENST00000530585 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
RPL27A-207ENST00000530585 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
RPL27A-207ENST00000530585 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
RPL27A-207ENST00000530585 WDR62O43379 1518 aa15.12■□□□□ 0.01
RPL27A-207ENST00000530585 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
RPL27A-207ENST00000530585 ERCC6Q03468 1493 aa15.08■□□□□ 0
RPL27A-207ENST00000530585 IFT140Q96RY7 1462 aa15.08■□□□□ 0
RPL27A-207ENST00000530585 APLP2Q06481 763 aa15.07■□□□□ 0
RPL27A-207ENST00000530585 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
RPL27A-207ENST00000530585 ARAP1Q96P48 1450 aa15.05■□□□□ -0
RPL27A-207ENST00000530585 HRCP23327 699 aa15.04■□□□□ -0
RPL27A-207ENST00000530585 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
RPL27A-207ENST00000530585 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
RPL27A-207ENST00000530585 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
RPL27A-207ENST00000530585 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
RPL27A-207ENST00000530585 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
RPL27A-207ENST00000530585 GRIN2BQ13224 1484 aa15□□□□□ -0.01
RPL27A-207ENST00000530585 PBRM1Q86U86 1689 aa15□□□□□ -0.01
RPL27A-207ENST00000530585 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms