RNA–Protein interactions for RNA: ENST00000368877.9

AMD1-202, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 2 BASIC

Gene AMD1, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-202ENST00000368877 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
AMD1-202ENST00000368877 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
AMD1-202ENST00000368877 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
AMD1-202ENST00000368877 POTEDQ86YR6 584 aa24.55■■□□□ 1.52
AMD1-202ENST00000368877 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
AMD1-202ENST00000368877 FOXD1Q16676 465 aa23.51■■□□□ 1.35
AMD1-202ENST00000368877 MSH5O43196 834 aa22.65■■□□□ 1.22
AMD1-202ENST00000368877 PIAS4Q8N2W9 510 aaPredicted RBP21.65■■□□□ 1.06
AMD1-202ENST00000368877 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
AMD1-202ENST00000368877 ADRA2BP18089 450 aa20.68■□□□□ 0.9
AMD1-202ENST00000368877 CACNB1Q02641 598 aaPredicted RBP20.35■□□□□ 0.85
AMD1-202ENST00000368877 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
AMD1-202ENST00000368877 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
AMD1-202ENST00000368877 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
AMD1-202ENST00000368877 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
AMD1-202ENST00000368877 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
AMD1-202ENST00000368877 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
AMD1-202ENST00000368877 POTEHQ6S545 545 aa18.97■□□□□ 0.63
AMD1-202ENST00000368877 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
AMD1-202ENST00000368877 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
AMD1-202ENST00000368877 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
AMD1-202ENST00000368877 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
AMD1-202ENST00000368877 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
AMD1-202ENST00000368877 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
AMD1-202ENST00000368877 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.41
AMD1-202ENST00000368877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
AMD1-202ENST00000368877 DSG3P32926 999 aa17.41■□□□□ 0.38
AMD1-202ENST00000368877 CAPN15O75808 1086 aa17.23■□□□□ 0.35
AMD1-202ENST00000368877 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
AMD1-202ENST00000368877 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
AMD1-202ENST00000368877 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
AMD1-202ENST00000368877 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
AMD1-202ENST00000368877 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
AMD1-202ENST00000368877 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
AMD1-202ENST00000368877 ABCB7O75027 752 aa16.66■□□□□ 0.26
AMD1-202ENST00000368877 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
AMD1-202ENST00000368877 ABCC9O60706 1549 aa16.58■□□□□ 0.25
AMD1-202ENST00000368877 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
AMD1-202ENST00000368877 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
AMD1-202ENST00000368877 APLP2Q06481 763 aa16.43■□□□□ 0.22
AMD1-202ENST00000368877 HAX1O00165 279 aa16.33■□□□□ 0.2
AMD1-202ENST00000368877 PLSCR2Q9NRY7 297 aa16.3■□□□□ 0.2
AMD1-202ENST00000368877 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
AMD1-202ENST00000368877 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
AMD1-202ENST00000368877 LHX8Q68G74 356 aa16.03■□□□□ 0.16
AMD1-202ENST00000368877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
AMD1-202ENST00000368877 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
AMD1-202ENST00000368877 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
AMD1-202ENST00000368877 EVX2Q03828 476 aa15.91■□□□□ 0.14
AMD1-202ENST00000368877 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.13
AMD1-202ENST00000368877 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.13
AMD1-202ENST00000368877 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.13
AMD1-202ENST00000368877 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
AMD1-202ENST00000368877 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
AMD1-202ENST00000368877 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
AMD1-202ENST00000368877 POLA2Q14181 598 aa15.78■□□□□ 0.12
AMD1-202ENST00000368877 NACADO15069 1562 aa15.75■□□□□ 0.11
AMD1-202ENST00000368877 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
AMD1-202ENST00000368877 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
AMD1-202ENST00000368877 GABBR2O75899 941 aa15.54■□□□□ 0.08
AMD1-202ENST00000368877 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
AMD1-202ENST00000368877 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
AMD1-202ENST00000368877 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
AMD1-202ENST00000368877 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.06
AMD1-202ENST00000368877 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
AMD1-202ENST00000368877 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
AMD1-202ENST00000368877 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
AMD1-202ENST00000368877 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
AMD1-202ENST00000368877 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
AMD1-202ENST00000368877 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
AMD1-202ENST00000368877 POTEMA6NI47 508 aa15.17■□□□□ 0.02
AMD1-202ENST00000368877 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
AMD1-202ENST00000368877 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
AMD1-202ENST00000368877 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
AMD1-202ENST00000368877 POTEGQ6S5H5 508 aa15.07■□□□□ 0
AMD1-202ENST00000368877 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
AMD1-202ENST00000368877 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
AMD1-202ENST00000368877 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
AMD1-202ENST00000368877 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
AMD1-202ENST00000368877 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
AMD1-202ENST00000368877 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
AMD1-202ENST00000368877 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
AMD1-202ENST00000368877 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
AMD1-202ENST00000368877 DCBLD2Q96PD2 775 aa14.87□□□□□ -0.03
AMD1-202ENST00000368877 CLCN6P51797 869 aa14.85□□□□□ -0.03
AMD1-202ENST00000368877 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
AMD1-202ENST00000368877 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
AMD1-202ENST00000368877 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
AMD1-202ENST00000368877 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
AMD1-202ENST00000368877 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
AMD1-202ENST00000368877 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
AMD1-202ENST00000368877 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
AMD1-202ENST00000368877 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
AMD1-202ENST00000368877 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
AMD1-202ENST00000368877 KCNA4P22459 653 aa14.55□□□□□ -0.08
AMD1-202ENST00000368877 HRCP23327 699 aa14.52□□□□□ -0.08
AMD1-202ENST00000368877 ATAD2BQ9ULI0 1458 aa14.49□□□□□ -0.09
AMD1-202ENST00000368877 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
AMD1-202ENST00000368877 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
AMD1-202ENST00000368877 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms