RNA–Protein interactions for RNA: ENST00000376755.1

RBM3-202, Transcript of RNA binding motif protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RBM3, Length 1,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-202ENST00000376755 NISCHQ9Y2I1 1504 aa39.15■■■■□ 3.86
RBM3-202ENST00000376755 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
RBM3-202ENST00000376755 ABCC9O60706 1549 aa34.35■■■■□ 3.09
RBM3-202ENST00000376755 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
RBM3-202ENST00000376755 NACADO15069 1562 aa32.74■■■□□ 2.83
RBM3-202ENST00000376755 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
RBM3-202ENST00000376755 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
RBM3-202ENST00000376755 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
RBM3-202ENST00000376755 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
RBM3-202ENST00000376755 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
RBM3-202ENST00000376755 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
RBM3-202ENST00000376755 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.712e-6■□□□□ 8.1
RBM3-202ENST00000376755 BICRAQ9NZM4 1560 aa31.78■■■□□ 2.68
RBM3-202ENST00000376755 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
RBM3-202ENST00000376755 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
RBM3-202ENST00000376755 AEBP2Q6ZN18 517 aaPredicted RBP31.44■■■□□ 2.62
RBM3-202ENST00000376755 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
RBM3-202ENST00000376755 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
RBM3-202ENST00000376755 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
RBM3-202ENST00000376755 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
RBM3-202ENST00000376755 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
RBM3-202ENST00000376755 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
RBM3-202ENST00000376755 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
RBM3-202ENST00000376755 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
RBM3-202ENST00000376755 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
RBM3-202ENST00000376755 MROH2BQ7Z745 1585 aa30.16■■■□□ 2.42
RBM3-202ENST00000376755 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
RBM3-202ENST00000376755 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
RBM3-202ENST00000376755 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
RBM3-202ENST00000376755 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
RBM3-202ENST00000376755 WIZO95785 1651 aa29.85■■■□□ 2.37
RBM3-202ENST00000376755 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
RBM3-202ENST00000376755 CUX2O14529 1486 aa29.63■■■□□ 2.33
RBM3-202ENST00000376755 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
RBM3-202ENST00000376755 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
RBM3-202ENST00000376755 NESP48681 1621 aa29.49■■■□□ 2.31
RBM3-202ENST00000376755 LAMC3Q9Y6N6 1575 aa29.42■■■□□ 2.3
RBM3-202ENST00000376755 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
RBM3-202ENST00000376755 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
RBM3-202ENST00000376755 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
RBM3-202ENST00000376755 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
RBM3-202ENST00000376755 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
RBM3-202ENST00000376755 CFTRP13569 1480 aa29.13■■■□□ 2.25
RBM3-202ENST00000376755 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
RBM3-202ENST00000376755 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
RBM3-202ENST00000376755 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
RBM3-202ENST00000376755 CEP164Q9UPV0 1460 aa28.93■■■□□ 2.22
RBM3-202ENST00000376755 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
RBM3-202ENST00000376755 WDR62O43379 1518 aa28.83■■■□□ 2.21
RBM3-202ENST00000376755 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
RBM3-202ENST00000376755 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
RBM3-202ENST00000376755 TOPBP1Q92547 1522 aa28.51■■■□□ 2.15
RBM3-202ENST00000376755 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
RBM3-202ENST00000376755 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
RBM3-202ENST00000376755 IFT140Q96RY7 1462 aa28.33■■■□□ 2.13
RBM3-202ENST00000376755 CUX1P39880 1505 aa28.3■■■□□ 2.12
RBM3-202ENST00000376755 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
RBM3-202ENST00000376755 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
RBM3-202ENST00000376755 OSCARQ8IYS5 282 aa28.22■■■□□ 2.11
RBM3-202ENST00000376755 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
RBM3-202ENST00000376755 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
RBM3-202ENST00000376755 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
RBM3-202ENST00000376755 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
RBM3-202ENST00000376755 SOGA1O94964 1423 aa28.1■■■□□ 2.09
RBM3-202ENST00000376755 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.09
RBM3-202ENST00000376755 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
RBM3-202ENST00000376755 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
RBM3-202ENST00000376755 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
RBM3-202ENST00000376755 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
RBM3-202ENST00000376755 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.071e-8■■■■■ 43
RBM3-202ENST00000376755 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
RBM3-202ENST00000376755 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
RBM3-202ENST00000376755 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
RBM3-202ENST00000376755 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
RBM3-202ENST00000376755 TDRD9Q8NDG6 1382 aaKnown RBP27.92■■■□□ 2.06
RBM3-202ENST00000376755 ABCA5Q8WWZ7 1642 aa27.86■■■□□ 2.05
RBM3-202ENST00000376755 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
RBM3-202ENST00000376755 PBRM1Q86U86 1689 aa27.82■■■□□ 2.04
RBM3-202ENST00000376755 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
RBM3-202ENST00000376755 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
RBM3-202ENST00000376755 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
RBM3-202ENST00000376755 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
RBM3-202ENST00000376755 CHD1O14646 1710 aa27.76■■■□□ 2.03
RBM3-202ENST00000376755 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
RBM3-202ENST00000376755 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
RBM3-202ENST00000376755 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
RBM3-202ENST00000376755 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
RBM3-202ENST00000376755 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
RBM3-202ENST00000376755 FBLN2P98095 1184 aa27.58■■■□□ 2.01
RBM3-202ENST00000376755 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
RBM3-202ENST00000376755 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
RBM3-202ENST00000376755 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
RBM3-202ENST00000376755 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
RBM3-202ENST00000376755 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
RBM3-202ENST00000376755 CUL7Q14999 1698 aa27.4■■□□□ 1.98
RBM3-202ENST00000376755 IGF1RP08069 1367 aa27.36■■□□□ 1.97
RBM3-202ENST00000376755 NUP160Q12769 1436 aa27.35■■□□□ 1.97
RBM3-202ENST00000376755 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
RBM3-202ENST00000376755 TRHP20396 242 aaPredicted RBP27.3■■□□□ 1.96
RBM3-202ENST00000376755 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms