RNA–Protein interactions for RNA: ENST00000371473.7

NSMF-204, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

TSL 1 (best) BASIC

Gene NSMF, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-204ENST00000371473 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
NSMF-204ENST00000371473 SHROOM4Q9ULL8 1493 aa30.79■■■□□ 2.52
NSMF-204ENST00000371473 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
NSMF-204ENST00000371473 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
NSMF-204ENST00000371473 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
NSMF-204ENST00000371473 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
NSMF-204ENST00000371473 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
NSMF-204ENST00000371473 PCGF6Q9BYE7 350 aa28.53■■■□□ 2.16
NSMF-204ENST00000371473 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
NSMF-204ENST00000371473 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
NSMF-204ENST00000371473 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.11
NSMF-204ENST00000371473 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
NSMF-204ENST00000371473 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
NSMF-204ENST00000371473 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
NSMF-204ENST00000371473 HRCP23327 699 aa27.81■■■□□ 2.04
NSMF-204ENST00000371473 ABCC9O60706 1549 aa27.81■■■□□ 2.04
NSMF-204ENST00000371473 TTBK1Q5TCY1 1321 aaPredicted RBP27.65■■■□□ 2.02
NSMF-204ENST00000371473 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
NSMF-204ENST00000371473 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
NSMF-204ENST00000371473 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
NSMF-204ENST00000371473 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
NSMF-204ENST00000371473 PABPN1Q86U42 306 aaKnown RBP eCLIP27.14■■□□□ 1.943e-7■■■□□ 15.6
NSMF-204ENST00000371473 RANGAP1P46060 587 aaPredicted RBP27.09■■□□□ 1.93
NSMF-204ENST00000371473 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
NSMF-204ENST00000371473 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
NSMF-204ENST00000371473 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
NSMF-204ENST00000371473 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
NSMF-204ENST00000371473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
NSMF-204ENST00000371473 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
NSMF-204ENST00000371473 ZEB1P37275 1124 aaPredicted RBP26.67■■□□□ 1.86
NSMF-204ENST00000371473 NACADO15069 1562 aa26.54■■□□□ 1.84
NSMF-204ENST00000371473 WIZO95785 1651 aa26.51■■□□□ 1.84
NSMF-204ENST00000371473 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
NSMF-204ENST00000371473 APLP2Q06481 763 aa26.4■■□□□ 1.82
NSMF-204ENST00000371473 CSRNP3Q8WYN3 585 aa26.31■■□□□ 1.8
NSMF-204ENST00000371473 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
NSMF-204ENST00000371473 SOGA1O94964 1423 aa26.2■■□□□ 1.78
NSMF-204ENST00000371473 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
NSMF-204ENST00000371473 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
NSMF-204ENST00000371473 YTHDC1Q96MU7 727 aaKnown RBP26.16■■□□□ 1.78
NSMF-204ENST00000371473 ITGAEP38570 1179 aa26.04■■□□□ 1.76
NSMF-204ENST00000371473 DIEXFQ68CQ4 756 aaKnown RBP26.02■■□□□ 1.76
NSMF-204ENST00000371473 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
NSMF-204ENST00000371473 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
NSMF-204ENST00000371473 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
NSMF-204ENST00000371473 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
NSMF-204ENST00000371473 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
NSMF-204ENST00000371473 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
NSMF-204ENST00000371473 SCAF1Q9H7N4 1312 aaKnown RBP25.8■■□□□ 1.72
NSMF-204ENST00000371473 CENPBP07199 599 aaPredicted RBP25.75■■□□□ 1.71
NSMF-204ENST00000371473 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
NSMF-204ENST00000371473 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
NSMF-204ENST00000371473 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
NSMF-204ENST00000371473 CLIP1P30622 1438 aa25.66■■□□□ 1.7
NSMF-204ENST00000371473 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
NSMF-204ENST00000371473 GOLGA3Q08378 1498 aa25.64■■□□□ 1.69
NSMF-204ENST00000371473 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
NSMF-204ENST00000371473 GTF3C3Q9Y5Q9 886 aa25.62■■□□□ 1.69
NSMF-204ENST00000371473 ZNF316A6NFI3 1004 aaPredicted RBP25.6■■□□□ 1.69
NSMF-204ENST00000371473 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
NSMF-204ENST00000371473 EEA1Q15075 1411 aa25.51■■□□□ 1.67
NSMF-204ENST00000371473 ATAD2BQ9ULI0 1458 aa25.46■■□□□ 1.67
NSMF-204ENST00000371473 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
NSMF-204ENST00000371473 RAPGEF2Q9Y4G8 1499 aa25.42■■□□□ 1.66
NSMF-204ENST00000371473 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
NSMF-204ENST00000371473 MIER1Q8N108 512 aa25.4■■□□□ 1.66
NSMF-204ENST00000371473 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.66
NSMF-204ENST00000371473 KANK4Q5T7N3 995 aaPredicted RBP25.37■■□□□ 1.65
NSMF-204ENST00000371473 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
NSMF-204ENST00000371473 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
NSMF-204ENST00000371473 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
NSMF-204ENST00000371473 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
NSMF-204ENST00000371473 ARID3CA6NKF2 412 aa25.18■■□□□ 1.62
NSMF-204ENST00000371473 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
NSMF-204ENST00000371473 KIF27Q86VH2 1401 aa25.09■■□□□ 1.61
NSMF-204ENST00000371473 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
NSMF-204ENST00000371473 CUX2O14529 1486 aa25■■□□□ 1.59
NSMF-204ENST00000371473 KIF21BO75037 1637 aa24.94■■□□□ 1.58
NSMF-204ENST00000371473 SIN3AQ96ST3 1273 aa24.93■■□□□ 1.58
NSMF-204ENST00000371473 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
NSMF-204ENST00000371473 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
NSMF-204ENST00000371473 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
NSMF-204ENST00000371473 BCANQ96GW7 911 aa24.86■■□□□ 1.57
NSMF-204ENST00000371473 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
NSMF-204ENST00000371473 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
NSMF-204ENST00000371473 CHIC2Q9UKJ5 165 aa24.79■■□□□ 1.56
NSMF-204ENST00000371473 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
NSMF-204ENST00000371473 CUX1P39880 1505 aa24.78■■□□□ 1.56
NSMF-204ENST00000371473 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
NSMF-204ENST00000371473 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
NSMF-204ENST00000371473 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
NSMF-204ENST00000371473 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
NSMF-204ENST00000371473 IGF1RP08069 1367 aa24.73■■□□□ 1.55
NSMF-204ENST00000371473 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
NSMF-204ENST00000371473 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
NSMF-204ENST00000371473 KCNH8Q96L42 1107 aa24.7■■□□□ 1.55
NSMF-204ENST00000371473 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
NSMF-204ENST00000371473 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
NSMF-204ENST00000371473 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
NSMF-204ENST00000371473 POLR3GLQ9BT43 218 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms