RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 NISCHQ9Y2I1 1504 aa50.56■■■■■ 5.68
TRIM8-203ENST00000479004 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.83
TRIM8-203ENST00000479004 ABCC9O60706 1549 aa44.75■■■■■ 4.76
TRIM8-203ENST00000479004 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
TRIM8-203ENST00000479004 NACADO15069 1562 aa42.62■■■■■ 4.41
TRIM8-203ENST00000479004 DCAF8L2P0C7V8 631 aa42.46■■■■■ 4.39
TRIM8-203ENST00000479004 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
TRIM8-203ENST00000479004 ZCCHC6Q5VYS8 1495 aaKnown RBP41.98■■■■■ 4.31
TRIM8-203ENST00000479004 UNC13AQ9UPW8 1703 aa41.88■■■■■ 4.29
TRIM8-203ENST00000479004 DCAF1Q9Y4B6 1507 aa41.8■■■■■ 4.28
TRIM8-203ENST00000479004 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
TRIM8-203ENST00000479004 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
TRIM8-203ENST00000479004 BICRAQ9NZM4 1560 aa41.56■■■■■ 4.24
TRIM8-203ENST00000479004 SCRIBQ14160 1630 aa41.18■■■■■ 4.18
TRIM8-203ENST00000479004 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
TRIM8-203ENST00000479004 EIF4G1Q04637 1599 aaKnown RBP40.49■■■■■ 4.07
TRIM8-203ENST00000479004 CC2D2AQ9P2K1 1620 aa40.48■■■■■ 4.07
TRIM8-203ENST00000479004 CECR2Q9BXF3 1484 aa40.28■■■■■ 4.04
TRIM8-203ENST00000479004 SMARCA4P51532 1647 aa39.35■■■■□ 3.89
TRIM8-203ENST00000479004 NCAPD3P42695 1498 aa39.35■■■■□ 3.89
TRIM8-203ENST00000479004 ATAD2BQ9ULI0 1458 aa39.28■■■■□ 3.88
TRIM8-203ENST00000479004 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
TRIM8-203ENST00000479004 SMARCA2P51531 1590 aa39.18■■■■□ 3.86
TRIM8-203ENST00000479004 HMGXB3Q12766 1538 aa39.08■■■■□ 3.85
TRIM8-203ENST00000479004 PEG3Q9GZU2 1588 aa38.98■■■■□ 3.83
TRIM8-203ENST00000479004 MROH2BQ7Z745 1585 aa38.95■■■■□ 3.83
TRIM8-203ENST00000479004 BAZ1BQ9UIG0 1483 aaKnown RBP38.9■■■■□ 3.82
TRIM8-203ENST00000479004 ERCC6Q03468 1493 aa38.6■■■■□ 3.77
TRIM8-203ENST00000479004 NESP48681 1621 aa38.57■■■■□ 3.77
TRIM8-203ENST00000479004 WIZO95785 1651 aa38.52■■■■□ 3.76
TRIM8-203ENST00000479004 CUX2O14529 1486 aa38.42■■■■□ 3.74
TRIM8-203ENST00000479004 LAMC3Q9Y6N6 1575 aa38.4■■■■□ 3.74
TRIM8-203ENST00000479004 RSF1Q96T23 1441 aaPredicted RBP38.29■■■■□ 3.72
TRIM8-203ENST00000479004 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
TRIM8-203ENST00000479004 PDS5BQ9NTI5 1447 aa38.15■■■■□ 3.7
TRIM8-203ENST00000479004 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
TRIM8-203ENST00000479004 KIF21AQ7Z4S6 1674 aa38.11■■■■□ 3.69
TRIM8-203ENST00000479004 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
TRIM8-203ENST00000479004 DNAJC5Q9H3Z4 198 aa37.94■■■■□ 3.66
TRIM8-203ENST00000479004 CFTRP13569 1480 aa37.82■■■■□ 3.64
TRIM8-203ENST00000479004 MRC2Q9UBG0 1479 aa37.78■■■■□ 3.64
TRIM8-203ENST00000479004 FANCD2Q9BXW9 1451 aa37.71■■■■□ 3.63
TRIM8-203ENST00000479004 CEP164Q9UPV0 1460 aa37.71■■■■□ 3.63
TRIM8-203ENST00000479004 WDR62O43379 1518 aa37.7■■■■□ 3.63
TRIM8-203ENST00000479004 CCDC88BA6NC98 1476 aa37.63■■■■□ 3.61
TRIM8-203ENST00000479004 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
TRIM8-203ENST00000479004 URB2Q14146 1524 aaKnown RBP37.39■■■■□ 3.58
TRIM8-203ENST00000479004 TOPBP1Q92547 1522 aa37.05■■■■□ 3.52
TRIM8-203ENST00000479004 ABCC8Q09428 1581 aa37.03■■■■□ 3.52
TRIM8-203ENST00000479004 IFT140Q96RY7 1462 aa36.96■■■■□ 3.51
TRIM8-203ENST00000479004 DNMBPQ6XZF7 1577 aa36.95■■■■□ 3.51
TRIM8-203ENST00000479004 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
TRIM8-203ENST00000479004 ZNF608Q9ULD9 1512 aaPredicted RBP36.85■■■■□ 3.49
TRIM8-203ENST00000479004 OSCARQ8IYS5 282 aa36.74■■■■□ 3.47
TRIM8-203ENST00000479004 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
TRIM8-203ENST00000479004 POLA1P09884 1462 aaPredicted RBP36.7■■■■□ 3.47
TRIM8-203ENST00000479004 EIF4G3O43432 1585 aaKnown RBP36.67■■■■□ 3.46
TRIM8-203ENST00000479004 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.453e-9■■■■■ 33.8
TRIM8-203ENST00000479004 CUX1P39880 1505 aa36.57■■■■□ 3.44
TRIM8-203ENST00000479004 RAD54L2Q9Y4B4 1467 aa36.56■■■■□ 3.44
TRIM8-203ENST00000479004 SOGA1O94964 1423 aa36.55■■■■□ 3.44
TRIM8-203ENST00000479004 FGD5Q6ZNL6 1462 aa36.53■■■■□ 3.44
TRIM8-203ENST00000479004 TRIM41Q8WV44 630 aa36.41■■■■□ 3.42
TRIM8-203ENST00000479004 TDRD9Q8NDG6 1382 aaKnown RBP36.4■■■■□ 3.42
TRIM8-203ENST00000479004 WDR97A6NE52 1622 aa36.37■■■■□ 3.41
TRIM8-203ENST00000479004 CHD1O14646 1710 aa36.34■■■■□ 3.41
TRIM8-203ENST00000479004 FBLN2P98095 1184 aa36.23■■■■□ 3.39
TRIM8-203ENST00000479004 RIMBP3CA6NJZ7 1639 aa36.22■■■■□ 3.39
TRIM8-203ENST00000479004 RIMBP3BA6NNM3 1639 aa36.22■■■■□ 3.39
TRIM8-203ENST00000479004 RIMBP3Q9UFD9 1639 aa36.22■■■■□ 3.39
TRIM8-203ENST00000479004 SNAPC4Q5SXM2 1469 aa36.21■■■■□ 3.39
TRIM8-203ENST00000479004 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
TRIM8-203ENST00000479004 ABCA10Q8WWZ4 1543 aa36.15■■■■□ 3.38
TRIM8-203ENST00000479004 MAGI1Q96QZ7 1491 aaPredicted RBP36.14■■■■□ 3.38
TRIM8-203ENST00000479004 ARHGEF11O15085 1522 aa36.13■■■■□ 3.38
TRIM8-203ENST00000479004 WRNQ14191 1432 aaPredicted RBP eCLIP36.11■■■■□ 3.37
TRIM8-203ENST00000479004 TOP2BQ02880 1626 aa36.11■■■■□ 3.37
TRIM8-203ENST00000479004 BIVM-ERCC5R4GMW8 1640 aa36.11■■■■□ 3.37
TRIM8-203ENST00000479004 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
TRIM8-203ENST00000479004 PBRM1Q86U86 1689 aa36.08■■■■□ 3.37
TRIM8-203ENST00000479004 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
TRIM8-203ENST00000479004 ABCA5Q8WWZ7 1642 aa36.06■■■■□ 3.36
TRIM8-203ENST00000479004 CHMP7Q8WUX9 453 aaPredicted RBP36.06■■■■□ 3.36
TRIM8-203ENST00000479004 SYNJ2O15056 1496 aa36.01■■■■□ 3.36
TRIM8-203ENST00000479004 CLASP1Q7Z460 1538 aa35.93■■■■□ 3.34
TRIM8-203ENST00000479004 CYB5RLQ6IPT4 315 aa35.85■■■■□ 3.33
TRIM8-203ENST00000479004 ARAP1Q96P48 1450 aa35.81■■■■□ 3.32
TRIM8-203ENST00000479004 ADAMTS12P58397 1594 aa35.75■■■■□ 3.31
TRIM8-203ENST00000479004 GRIN2AQ12879 1464 aa35.71■■■■□ 3.31
TRIM8-203ENST00000479004 ERICH3Q5RHP9 1530 aa35.71■■■■□ 3.31
TRIM8-203ENST00000479004 FHAD1B1AJZ9 1412 aa35.67■■■■□ 3.3
TRIM8-203ENST00000479004 NUP160Q12769 1436 aa35.59■■■■□ 3.29
TRIM8-203ENST00000479004 CEP170Q5SW79 1584 aa35.57■■■■□ 3.28
TRIM8-203ENST00000479004 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
TRIM8-203ENST00000479004 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
TRIM8-203ENST00000479004 ERCC6L2Q5T890 1561 aa35.39■■■■□ 3.26
TRIM8-203ENST00000479004 IGF1RP08069 1367 aa35.36■■■■□ 3.25
TRIM8-203ENST00000479004 TRHP20396 242 aaPredicted RBP35.29■■■■□ 3.24
TRIM8-203ENST00000479004 CUL7Q14999 1698 aa35.27■■■■□ 3.24
TRIM8-203ENST00000479004 JPH4Q96JJ6 628 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms