RNA–Protein interactions for RNA: ENST00000441563.5

AL109827.1-202, humanhuman

APPRIS ALT2 TSL 2

Gene AL109827.1, Length 611 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109827.1-202ENST00000441563 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
AL109827.1-202ENST00000441563 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
AL109827.1-202ENST00000441563 ABCC9O60706 1549 aa20.94■□□□□ 0.94
AL109827.1-202ENST00000441563 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
AL109827.1-202ENST00000441563 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
AL109827.1-202ENST00000441563 NACADO15069 1562 aa19.96■□□□□ 0.79
AL109827.1-202ENST00000441563 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
AL109827.1-202ENST00000441563 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
AL109827.1-202ENST00000441563 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
AL109827.1-202ENST00000441563 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
AL109827.1-202ENST00000441563 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
AL109827.1-202ENST00000441563 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
AL109827.1-202ENST00000441563 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
AL109827.1-202ENST00000441563 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
AL109827.1-202ENST00000441563 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
AL109827.1-202ENST00000441563 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
AL109827.1-202ENST00000441563 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
AL109827.1-202ENST00000441563 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
AL109827.1-202ENST00000441563 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
AL109827.1-202ENST00000441563 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
AL109827.1-202ENST00000441563 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
AL109827.1-202ENST00000441563 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
AL109827.1-202ENST00000441563 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
AL109827.1-202ENST00000441563 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
AL109827.1-202ENST00000441563 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
AL109827.1-202ENST00000441563 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
AL109827.1-202ENST00000441563 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
AL109827.1-202ENST00000441563 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
AL109827.1-202ENST00000441563 WIZO95785 1651 aa18.3■□□□□ 0.52
AL109827.1-202ENST00000441563 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
AL109827.1-202ENST00000441563 NESP48681 1621 aa18.1■□□□□ 0.49
AL109827.1-202ENST00000441563 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
AL109827.1-202ENST00000441563 ERCC6Q03468 1493 aa18.05■□□□□ 0.48
AL109827.1-202ENST00000441563 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
AL109827.1-202ENST00000441563 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
AL109827.1-202ENST00000441563 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
AL109827.1-202ENST00000441563 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
AL109827.1-202ENST00000441563 CFTRP13569 1480 aa17.84■□□□□ 0.45
AL109827.1-202ENST00000441563 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
AL109827.1-202ENST00000441563 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
AL109827.1-202ENST00000441563 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
AL109827.1-202ENST00000441563 CUX2O14529 1486 aa17.71■□□□□ 0.43
AL109827.1-202ENST00000441563 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
AL109827.1-202ENST00000441563 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
AL109827.1-202ENST00000441563 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
AL109827.1-202ENST00000441563 WDR62O43379 1518 aa17.57■□□□□ 0.4
AL109827.1-202ENST00000441563 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
AL109827.1-202ENST00000441563 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
AL109827.1-202ENST00000441563 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
AL109827.1-202ENST00000441563 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
AL109827.1-202ENST00000441563 CUX1P39880 1505 aa17.36■□□□□ 0.37
AL109827.1-202ENST00000441563 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
AL109827.1-202ENST00000441563 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
AL109827.1-202ENST00000441563 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
AL109827.1-202ENST00000441563 SOGA1O94964 1423 aa17.33■□□□□ 0.36
AL109827.1-202ENST00000441563 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
AL109827.1-202ENST00000441563 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
AL109827.1-202ENST00000441563 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
AL109827.1-202ENST00000441563 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
AL109827.1-202ENST00000441563 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.367e-7■■■■□ 21.9
AL109827.1-202ENST00000441563 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
AL109827.1-202ENST00000441563 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
AL109827.1-202ENST00000441563 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
AL109827.1-202ENST00000441563 FBLN2P98095 1184 aa17.2■□□□□ 0.34
AL109827.1-202ENST00000441563 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
AL109827.1-202ENST00000441563 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
AL109827.1-202ENST00000441563 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
AL109827.1-202ENST00000441563 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
AL109827.1-202ENST00000441563 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
AL109827.1-202ENST00000441563 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
AL109827.1-202ENST00000441563 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
AL109827.1-202ENST00000441563 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
AL109827.1-202ENST00000441563 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
AL109827.1-202ENST00000441563 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
AL109827.1-202ENST00000441563 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
AL109827.1-202ENST00000441563 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
AL109827.1-202ENST00000441563 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
AL109827.1-202ENST00000441563 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
AL109827.1-202ENST00000441563 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
AL109827.1-202ENST00000441563 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
AL109827.1-202ENST00000441563 CHD1O14646 1710 aa16.93■□□□□ 0.3
AL109827.1-202ENST00000441563 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
AL109827.1-202ENST00000441563 IGF1RP08069 1367 aa16.88■□□□□ 0.29
AL109827.1-202ENST00000441563 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
AL109827.1-202ENST00000441563 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
AL109827.1-202ENST00000441563 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
AL109827.1-202ENST00000441563 GRIN2AQ12879 1464 aa16.83■□□□□ 0.28
AL109827.1-202ENST00000441563 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
AL109827.1-202ENST00000441563 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
AL109827.1-202ENST00000441563 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
AL109827.1-202ENST00000441563 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
AL109827.1-202ENST00000441563 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
AL109827.1-202ENST00000441563 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
AL109827.1-202ENST00000441563 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
AL109827.1-202ENST00000441563 NUP160Q12769 1436 aa16.73■□□□□ 0.27
AL109827.1-202ENST00000441563 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
AL109827.1-202ENST00000441563 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
AL109827.1-202ENST00000441563 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
AL109827.1-202ENST00000441563 CUL7Q14999 1698 aa16.7■□□□□ 0.26
AL109827.1-202ENST00000441563 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms