RNA–Protein interactions for RNA: ENST00000437259.5

NSMF-208, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NSMF, Length 3,577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-208ENST00000437259 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
NSMF-208ENST00000437259 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
NSMF-208ENST00000437259 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
NSMF-208ENST00000437259 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
NSMF-208ENST00000437259 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
NSMF-208ENST00000437259 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
NSMF-208ENST00000437259 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
NSMF-208ENST00000437259 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
NSMF-208ENST00000437259 PCGF6Q9BYE7 350 aa26.81■■□□□ 1.88
NSMF-208ENST00000437259 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
NSMF-208ENST00000437259 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
NSMF-208ENST00000437259 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
NSMF-208ENST00000437259 HRCP23327 699 aa26.39■■□□□ 1.81
NSMF-208ENST00000437259 PPARGC1BQ86YN6 1023 aaKnown RBP26.31■■□□□ 1.8
NSMF-208ENST00000437259 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
NSMF-208ENST00000437259 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
NSMF-208ENST00000437259 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
NSMF-208ENST00000437259 ABCC9O60706 1549 aa26.11■■□□□ 1.77
NSMF-208ENST00000437259 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
NSMF-208ENST00000437259 TRIM26Q12899 539 aaPredicted RBP25.86■■□□□ 1.73
NSMF-208ENST00000437259 TTBK1Q5TCY1 1321 aaPredicted RBP25.68■■□□□ 1.7
NSMF-208ENST00000437259 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
NSMF-208ENST00000437259 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
NSMF-208ENST00000437259 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
NSMF-208ENST00000437259 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.653e-7■■■□□ 15.6
NSMF-208ENST00000437259 NACADO15069 1562 aa25.3■■□□□ 1.64
NSMF-208ENST00000437259 WIZO95785 1651 aa25.29■■□□□ 1.64
NSMF-208ENST00000437259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
NSMF-208ENST00000437259 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.62
NSMF-208ENST00000437259 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
NSMF-208ENST00000437259 UBTFP17480 764 aaKnown RBP25.14■■□□□ 1.61
NSMF-208ENST00000437259 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
NSMF-208ENST00000437259 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
NSMF-208ENST00000437259 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
NSMF-208ENST00000437259 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
NSMF-208ENST00000437259 SOGA1O94964 1423 aa24.81■■□□□ 1.56
NSMF-208ENST00000437259 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
NSMF-208ENST00000437259 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.54
NSMF-208ENST00000437259 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
NSMF-208ENST00000437259 SMARCA4P51532 1647 aa24.66■■□□□ 1.54
NSMF-208ENST00000437259 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
NSMF-208ENST00000437259 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
NSMF-208ENST00000437259 APLP2Q06481 763 aa24.59■■□□□ 1.53
NSMF-208ENST00000437259 SMARCA2P51531 1590 aa24.58■■□□□ 1.53
NSMF-208ENST00000437259 DIEXFQ68CQ4 756 aaKnown RBP24.52■■□□□ 1.52
NSMF-208ENST00000437259 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
NSMF-208ENST00000437259 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
NSMF-208ENST00000437259 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
NSMF-208ENST00000437259 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.51
NSMF-208ENST00000437259 TNIKQ9UKE5 1360 aa24.45■■□□□ 1.5
NSMF-208ENST00000437259 YTHDC1Q96MU7 727 aaKnown RBP24.44■■□□□ 1.5
NSMF-208ENST00000437259 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
NSMF-208ENST00000437259 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
NSMF-208ENST00000437259 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
NSMF-208ENST00000437259 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
NSMF-208ENST00000437259 EEA1Q15075 1411 aa24.26■■□□□ 1.47
NSMF-208ENST00000437259 CLIP1P30622 1438 aa24.25■■□□□ 1.47
NSMF-208ENST00000437259 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
NSMF-208ENST00000437259 ITGAEP38570 1179 aa24.23■■□□□ 1.47
NSMF-208ENST00000437259 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
NSMF-208ENST00000437259 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
NSMF-208ENST00000437259 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
NSMF-208ENST00000437259 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
NSMF-208ENST00000437259 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
NSMF-208ENST00000437259 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
NSMF-208ENST00000437259 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.45
NSMF-208ENST00000437259 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
NSMF-208ENST00000437259 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
NSMF-208ENST00000437259 MIER1Q8N108 512 aa23.98■■□□□ 1.43
NSMF-208ENST00000437259 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
NSMF-208ENST00000437259 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
NSMF-208ENST00000437259 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
NSMF-208ENST00000437259 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
NSMF-208ENST00000437259 KIF21BO75037 1637 aa23.79■■□□□ 1.4
NSMF-208ENST00000437259 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
NSMF-208ENST00000437259 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
NSMF-208ENST00000437259 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
NSMF-208ENST00000437259 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
NSMF-208ENST00000437259 CUX1P39880 1505 aa23.6■■□□□ 1.37
NSMF-208ENST00000437259 CUX2O14529 1486 aa23.59■■□□□ 1.37
NSMF-208ENST00000437259 MYT1Q01538 1121 aa23.59■■□□□ 1.37
NSMF-208ENST00000437259 PRXQ9BXM0 1461 aa23.55■■□□□ 1.36
NSMF-208ENST00000437259 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
NSMF-208ENST00000437259 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
NSMF-208ENST00000437259 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
NSMF-208ENST00000437259 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
NSMF-208ENST00000437259 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
NSMF-208ENST00000437259 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
NSMF-208ENST00000437259 IGF1RP08069 1367 aa23.42■■□□□ 1.34
NSMF-208ENST00000437259 CFTRP13569 1480 aa23.42■■□□□ 1.34
NSMF-208ENST00000437259 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
NSMF-208ENST00000437259 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
NSMF-208ENST00000437259 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
NSMF-208ENST00000437259 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
NSMF-208ENST00000437259 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
NSMF-208ENST00000437259 HMGXB3Q12766 1538 aa23.35■■□□□ 1.33
NSMF-208ENST00000437259 RAB3GAP2Q9H2M9 1393 aa23.35■■□□□ 1.33
NSMF-208ENST00000437259 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
NSMF-208ENST00000437259 KCNH8Q96L42 1107 aa23.32■■□□□ 1.32
NSMF-208ENST00000437259 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms