RNA–Protein interactions for RNA: ENST00000359428.9

NUP214-201, Transcript of nucleoporin 214, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP214, Length 7,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-201ENST00000359428 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
NUP214-201ENST00000359428 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
NUP214-201ENST00000359428 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
NUP214-201ENST00000359428 ERICH6Q7L0X2 663 aa13.52□□□□□ -0.25
NUP214-201ENST00000359428 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
NUP214-201ENST00000359428 MYT1Q01538 1121 aa13.41□□□□□ -0.26
NUP214-201ENST00000359428 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
NUP214-201ENST00000359428 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
NUP214-201ENST00000359428 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
NUP214-201ENST00000359428 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
NUP214-201ENST00000359428 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
NUP214-201ENST00000359428 APLP2Q06481 763 aa13.07□□□□□ -0.32
NUP214-201ENST00000359428 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.33
NUP214-201ENST00000359428 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
NUP214-201ENST00000359428 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
NUP214-201ENST00000359428 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
NUP214-201ENST00000359428 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
NUP214-201ENST00000359428 HRCP23327 699 aa12.8□□□□□ -0.36
NUP214-201ENST00000359428 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
NUP214-201ENST00000359428 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
NUP214-201ENST00000359428 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
NUP214-201ENST00000359428 NEFLP07196 543 aa12.67□□□□□ -0.38
NUP214-201ENST00000359428 CHIC1Q5VXU3 224 aa12.66□□□□□ -0.38
NUP214-201ENST00000359428 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
NUP214-201ENST00000359428 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
NUP214-201ENST00000359428 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
NUP214-201ENST00000359428 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
NUP214-201ENST00000359428 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
NUP214-201ENST00000359428 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
NUP214-201ENST00000359428 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
NUP214-201ENST00000359428 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
NUP214-201ENST00000359428 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
NUP214-201ENST00000359428 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
NUP214-201ENST00000359428 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
NUP214-201ENST00000359428 BCL11AQ9H165 835 aa12.36□□□□□ -0.43
NUP214-201ENST00000359428 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
NUP214-201ENST00000359428 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
NUP214-201ENST00000359428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
NUP214-201ENST00000359428 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
NUP214-201ENST00000359428 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
NUP214-201ENST00000359428 BCANQ96GW7 911 aa12.2□□□□□ -0.46
NUP214-201ENST00000359428 ITGAEP38570 1179 aa12.16□□□□□ -0.46
NUP214-201ENST00000359428 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
NUP214-201ENST00000359428 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
NUP214-201ENST00000359428 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
NUP214-201ENST00000359428 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
NUP214-201ENST00000359428 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
NUP214-201ENST00000359428 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
NUP214-201ENST00000359428 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
NUP214-201ENST00000359428 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
NUP214-201ENST00000359428 NEUROD1Q13562 356 aa11.9□□□□□ -0.5
NUP214-201ENST00000359428 CANXP27824 592 aaKnown RBP11.82□□□□□ -0.52
NUP214-201ENST00000359428 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
NUP214-201ENST00000359428 ANP32CO43423 234 aa11.8□□□□□ -0.52
NUP214-201ENST00000359428 FKBP8Q14318 412 aa11.79□□□□□ -0.52
NUP214-201ENST00000359428 A0A0G2JS52 829 aa11.78□□□□□ -0.52
NUP214-201ENST00000359428 ANP32AP39687 249 aaKnown RBP11.77□□□□□ -0.53
NUP214-201ENST00000359428 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
NUP214-201ENST00000359428 NBR1Q14596 966 aa11.75□□□□□ -0.53
NUP214-201ENST00000359428 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
NUP214-201ENST00000359428 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
NUP214-201ENST00000359428 FAM50AQ14320 339 aaKnown RBP11.71□□□□□ -0.53
NUP214-201ENST00000359428 FBLN2P98095 1184 aa11.71□□□□□ -0.54
NUP214-201ENST00000359428 HSP90AA1P07900 732 aaKnown RBP11.7□□□□□ -0.54
NUP214-201ENST00000359428 NEFMP07197 916 aa11.68□□□□□ -0.54
NUP214-201ENST00000359428 ARXQ96QS3 562 aa11.67□□□□□ -0.54
NUP214-201ENST00000359428 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
NUP214-201ENST00000359428 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
NUP214-201ENST00000359428 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
NUP214-201ENST00000359428 MIER1Q8N108 512 aa11.59□□□□□ -0.55
NUP214-201ENST00000359428 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
NUP214-201ENST00000359428 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP214-201ENST00000359428 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
NUP214-201ENST00000359428 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
NUP214-201ENST00000359428 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
NUP214-201ENST00000359428 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
NUP214-201ENST00000359428 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
NUP214-201ENST00000359428 DCAF1Q9Y4B6 1507 aa11.52□□□□□ -0.57
NUP214-201ENST00000359428 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
NUP214-201ENST00000359428 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
NUP214-201ENST00000359428 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
NUP214-201ENST00000359428 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
NUP214-201ENST00000359428 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
NUP214-201ENST00000359428 CLSTN1O94985 981 aa11.47□□□□□ -0.57
NUP214-201ENST00000359428 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
NUP214-201ENST00000359428 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
NUP214-201ENST00000359428 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.58
NUP214-201ENST00000359428 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
NUP214-201ENST00000359428 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
NUP214-201ENST00000359428 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
NUP214-201ENST00000359428 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
NUP214-201ENST00000359428 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
NUP214-201ENST00000359428 HIRIP3Q9BW71 556 aaPredicted RBP11.37□□□□□ -0.59
NUP214-201ENST00000359428 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
NUP214-201ENST00000359428 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP214-201ENST00000359428 ABCC9O60706 1549 aa11.35□□□□□ -0.59
NUP214-201ENST00000359428 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
NUP214-201ENST00000359428 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
NUP214-201ENST00000359428 MYO15BQ96JP2 1530 aa11.34□□□□□ -0.59
NUP214-201ENST00000359428 NPHP1O15259 732 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms