RNA–Protein interactions for RNA: ENST00000451850.6

AMD1-205, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-205ENST00000451850 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
AMD1-205ENST00000451850 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
AMD1-205ENST00000451850 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
AMD1-205ENST00000451850 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
AMD1-205ENST00000451850 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
AMD1-205ENST00000451850 ADRA2BP18089 450 aa13.95□□□□□ -0.18
AMD1-205ENST00000451850 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
AMD1-205ENST00000451850 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
AMD1-205ENST00000451850 KCNA4P22459 653 aa13.65□□□□□ -0.22
AMD1-205ENST00000451850 FOXD1Q16676 465 aa13.6□□□□□ -0.23
AMD1-205ENST00000451850 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
AMD1-205ENST00000451850 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
AMD1-205ENST00000451850 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
AMD1-205ENST00000451850 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
AMD1-205ENST00000451850 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
AMD1-205ENST00000451850 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
AMD1-205ENST00000451850 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
AMD1-205ENST00000451850 ZBTB22O15209 634 aa12.62□□□□□ -0.39
AMD1-205ENST00000451850 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
AMD1-205ENST00000451850 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
AMD1-205ENST00000451850 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
AMD1-205ENST00000451850 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
AMD1-205ENST00000451850 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
AMD1-205ENST00000451850 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
AMD1-205ENST00000451850 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
AMD1-205ENST00000451850 MSH5O43196 834 aa12.04□□□□□ -0.48
AMD1-205ENST00000451850 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
AMD1-205ENST00000451850 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
AMD1-205ENST00000451850 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
AMD1-205ENST00000451850 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
AMD1-205ENST00000451850 FKBP8Q14318 412 aa11.77□□□□□ -0.53
AMD1-205ENST00000451850 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
AMD1-205ENST00000451850 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
AMD1-205ENST00000451850 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
AMD1-205ENST00000451850 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
AMD1-205ENST00000451850 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
AMD1-205ENST00000451850 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
AMD1-205ENST00000451850 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
AMD1-205ENST00000451850 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
AMD1-205ENST00000451850 BCANQ96GW7 911 aa11.4□□□□□ -0.58
AMD1-205ENST00000451850 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
AMD1-205ENST00000451850 ARXQ96QS3 562 aa11.37□□□□□ -0.59
AMD1-205ENST00000451850 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
AMD1-205ENST00000451850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
AMD1-205ENST00000451850 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
AMD1-205ENST00000451850 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
AMD1-205ENST00000451850 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
AMD1-205ENST00000451850 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
AMD1-205ENST00000451850 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
AMD1-205ENST00000451850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
AMD1-205ENST00000451850 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
AMD1-205ENST00000451850 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
AMD1-205ENST00000451850 HOMEZQ8IX15 550 aa11.02□□□□□ -0.64
AMD1-205ENST00000451850 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
AMD1-205ENST00000451850 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
AMD1-205ENST00000451850 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
AMD1-205ENST00000451850 GTF3C3Q9Y5Q9 886 aa10.97□□□□□ -0.65
AMD1-205ENST00000451850 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
AMD1-205ENST00000451850 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
AMD1-205ENST00000451850 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
AMD1-205ENST00000451850 ABCC9O60706 1549 aa10.89□□□□□ -0.67
AMD1-205ENST00000451850 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
AMD1-205ENST00000451850 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
AMD1-205ENST00000451850 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
AMD1-205ENST00000451850 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
AMD1-205ENST00000451850 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
AMD1-205ENST00000451850 RANGAP1P46060 587 aaPredicted RBP10.8□□□□□ -0.68
AMD1-205ENST00000451850 POLA2Q14181 598 aa10.79□□□□□ -0.68
AMD1-205ENST00000451850 PROM2Q8N271 834 aa10.78□□□□□ -0.68
AMD1-205ENST00000451850 PKD2Q13563 968 aa10.77□□□□□ -0.69
AMD1-205ENST00000451850 FBLN2P98095 1184 aa10.77□□□□□ -0.69
AMD1-205ENST00000451850 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
AMD1-205ENST00000451850 APLP2Q06481 763 aa10.71□□□□□ -0.69
AMD1-205ENST00000451850 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
AMD1-205ENST00000451850 CAPN15O75808 1086 aa10.68□□□□□ -0.7
AMD1-205ENST00000451850 ABCB7O75027 752 aa10.64□□□□□ -0.71
AMD1-205ENST00000451850 CCDC180Q9P1Z9 1646 aa10.64□□□□□ -0.71
AMD1-205ENST00000451850 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
AMD1-205ENST00000451850 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
AMD1-205ENST00000451850 NPM1P06748 294 aaKnown RBP eCLIP10.6□□□□□ -0.71
AMD1-205ENST00000451850 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
AMD1-205ENST00000451850 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
AMD1-205ENST00000451850 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
AMD1-205ENST00000451850 RGL2O15211 777 aa10.5□□□□□ -0.73
AMD1-205ENST00000451850 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
AMD1-205ENST00000451850 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
AMD1-205ENST00000451850 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
AMD1-205ENST00000451850 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
AMD1-205ENST00000451850 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
AMD1-205ENST00000451850 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
AMD1-205ENST00000451850 TSHZ2Q9NRE2 1034 aa10.43□□□□□ -0.74
AMD1-205ENST00000451850 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
AMD1-205ENST00000451850 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
AMD1-205ENST00000451850 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
AMD1-205ENST00000451850 NBR1Q14596 966 aa10.41□□□□□ -0.74
AMD1-205ENST00000451850 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
AMD1-205ENST00000451850 MIER1Q8N108 512 aa10.4□□□□□ -0.75
AMD1-205ENST00000451850 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
AMD1-205ENST00000451850 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
AMD1-205ENST00000451850 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms