Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NR4A2P43354 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.95□□□□□ -0.02
NR4A2P43354 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.95□□□□□ -0.02
NR4A2P43354 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR4A2P43354 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
NR4A2P43354 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A2P43354 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.95□□□□□ -0.02
NR4A2P43354 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.94□□□□□ -0.02
NR4A2P43354 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
NR4A2P43354 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 AC007686.3-201ENST00000619017 3487 ntBASIC14.94□□□□□ -0.02
NR4A2P43354 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NR4A2P43354 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.94□□□□□ -0.02
NR4A2P43354 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 AP002490.2-201ENST00000524791 560 ntBASIC14.94□□□□□ -0.02
NR4A2P43354 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A2P43354 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A2P43354 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 AL365209.1-201ENST00000624418 6473 ntBASIC14.94□□□□□ -0.02
NR4A2P43354 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NR4A2P43354 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A2P43354 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A2P43354 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A2P43354 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A2P43354 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.93□□□□□ -0.02
NR4A2P43354 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.93□□□□□ -0.02
NR4A2P43354 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A2P43354 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NR4A2P43354 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NR4A2P43354 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms