RNA–Protein interactions for RNA: ENST00000372022.5

SURF6-201, Transcript of surfeit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF6, Length 4,447 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF6-201ENST00000372022 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
SURF6-201ENST00000372022 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
SURF6-201ENST00000372022 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
SURF6-201ENST00000372022 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
SURF6-201ENST00000372022 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
SURF6-201ENST00000372022 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
SURF6-201ENST00000372022 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.54
SURF6-201ENST00000372022 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
SURF6-201ENST00000372022 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
SURF6-201ENST00000372022 ZEB1P37275 1124 aaPredicted RBP24.46■■□□□ 1.51
SURF6-201ENST00000372022 HRCP23327 699 aa24.42■■□□□ 1.5
SURF6-201ENST00000372022 APLP2Q06481 763 aa24.22■■□□□ 1.47
SURF6-201ENST00000372022 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
SURF6-201ENST00000372022 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
SURF6-201ENST00000372022 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.45
SURF6-201ENST00000372022 CCER1Q8TC90 406 aaPredicted RBP24.09■■□□□ 1.45
SURF6-201ENST00000372022 CENPBP07199 599 aaPredicted RBP23.95■■□□□ 1.42
SURF6-201ENST00000372022 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
SURF6-201ENST00000372022 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
SURF6-201ENST00000372022 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
SURF6-201ENST00000372022 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
SURF6-201ENST00000372022 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
SURF6-201ENST00000372022 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
SURF6-201ENST00000372022 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
SURF6-201ENST00000372022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
SURF6-201ENST00000372022 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
SURF6-201ENST00000372022 ABCC9O60706 1549 aa23.22■■□□□ 1.31
SURF6-201ENST00000372022 ATP1B4Q9UN42 357 aaPredicted RBP23.22■■□□□ 1.31
SURF6-201ENST00000372022 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
SURF6-201ENST00000372022 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
SURF6-201ENST00000372022 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.29
SURF6-201ENST00000372022 MYT1Q01538 1121 aa23.12■■□□□ 1.29
SURF6-201ENST00000372022 NEFLP07196 543 aa22.97■■□□□ 1.27
SURF6-201ENST00000372022 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
SURF6-201ENST00000372022 ITGAEP38570 1179 aa22.95■■□□□ 1.26
SURF6-201ENST00000372022 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
SURF6-201ENST00000372022 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
SURF6-201ENST00000372022 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
SURF6-201ENST00000372022 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
SURF6-201ENST00000372022 ZNF316A6NFI3 1004 aaPredicted RBP22.75■■□□□ 1.23
SURF6-201ENST00000372022 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
SURF6-201ENST00000372022 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
SURF6-201ENST00000372022 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
SURF6-201ENST00000372022 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
SURF6-201ENST00000372022 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
SURF6-201ENST00000372022 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
SURF6-201ENST00000372022 NACADO15069 1562 aa22.29■■□□□ 1.16
SURF6-201ENST00000372022 EEA1Q15075 1411 aa22.27■■□□□ 1.16
SURF6-201ENST00000372022 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
SURF6-201ENST00000372022 POLR3GLQ9BT43 218 aa22.25■■□□□ 1.15
SURF6-201ENST00000372022 ANP32CO43423 234 aa22.2■■□□□ 1.14
SURF6-201ENST00000372022 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
SURF6-201ENST00000372022 CLIP1P30622 1438 aa22.18■■□□□ 1.14
SURF6-201ENST00000372022 BCANQ96GW7 911 aa22.16■■□□□ 1.14
SURF6-201ENST00000372022 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
SURF6-201ENST00000372022 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
SURF6-201ENST00000372022 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
SURF6-201ENST00000372022 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
SURF6-201ENST00000372022 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
SURF6-201ENST00000372022 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
SURF6-201ENST00000372022 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
SURF6-201ENST00000372022 MIER1Q8N108 512 aa22.08■■□□□ 1.13
SURF6-201ENST00000372022 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.129e-6■■■■■ 50.1
SURF6-201ENST00000372022 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
SURF6-201ENST00000372022 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
SURF6-201ENST00000372022 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
SURF6-201ENST00000372022 SOGA1O94964 1423 aa21.89■■□□□ 1.09
SURF6-201ENST00000372022 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
SURF6-201ENST00000372022 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
SURF6-201ENST00000372022 DAXXQ9UER7 740 aaPredicted RBP21.84■■□□□ 1.09
SURF6-201ENST00000372022 FKBP8Q14318 412 aa21.83■■□□□ 1.09
SURF6-201ENST00000372022 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
SURF6-201ENST00000372022 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
SURF6-201ENST00000372022 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
SURF6-201ENST00000372022 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
SURF6-201ENST00000372022 MYT1LQ9UL68 1186 aa21.75■■□□□ 1.07
SURF6-201ENST00000372022 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
SURF6-201ENST00000372022 WIZO95785 1651 aa21.72■■□□□ 1.07
SURF6-201ENST00000372022 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
SURF6-201ENST00000372022 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
SURF6-201ENST00000372022 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
SURF6-201ENST00000372022 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
SURF6-201ENST00000372022 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
SURF6-201ENST00000372022 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
SURF6-201ENST00000372022 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
SURF6-201ENST00000372022 FBLN2P98095 1184 aa21.56■■□□□ 1.04
SURF6-201ENST00000372022 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
SURF6-201ENST00000372022 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SURF6-201ENST00000372022 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
SURF6-201ENST00000372022 FAM9BQ8IZU0 186 aa21.51■■□□□ 1.03
SURF6-201ENST00000372022 SLC4A1APQ9BWU0 796 aaKnown RBP21.44■■□□□ 1.02
SURF6-201ENST00000372022 ANP32AP39687 249 aaKnown RBP21.42■■□□□ 1.02
SURF6-201ENST00000372022 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
SURF6-201ENST00000372022 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
SURF6-201ENST00000372022 MRS2Q9HD23 443 aa21.41■■□□□ 1.02
SURF6-201ENST00000372022 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
SURF6-201ENST00000372022 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
SURF6-201ENST00000372022 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
SURF6-201ENST00000372022 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
SURF6-201ENST00000372022 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms