RNA–Protein interactions for RNA: ENST00000526683.5

PUF60-208, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PUF60, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-208ENST00000526683 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
PUF60-208ENST00000526683 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
PUF60-208ENST00000526683 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
PUF60-208ENST00000526683 ABCC9O60706 1549 aa29.23■■■□□ 2.27
PUF60-208ENST00000526683 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
PUF60-208ENST00000526683 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
PUF60-208ENST00000526683 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
PUF60-208ENST00000526683 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
PUF60-208ENST00000526683 NACADO15069 1562 aa28.71■■■□□ 2.19
PUF60-208ENST00000526683 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
PUF60-208ENST00000526683 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
PUF60-208ENST00000526683 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
PUF60-208ENST00000526683 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
PUF60-208ENST00000526683 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PUF60-208ENST00000526683 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 23e-7■■■□□ 16.4
PUF60-208ENST00000526683 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
PUF60-208ENST00000526683 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.97
PUF60-208ENST00000526683 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
PUF60-208ENST00000526683 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
PUF60-208ENST00000526683 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
PUF60-208ENST00000526683 WIZO95785 1651 aa27.05■■□□□ 1.92
PUF60-208ENST00000526683 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
PUF60-208ENST00000526683 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
PUF60-208ENST00000526683 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
PUF60-208ENST00000526683 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.87
PUF60-208ENST00000526683 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
PUF60-208ENST00000526683 SMARCA2P51531 1590 aa26.7■■□□□ 1.86
PUF60-208ENST00000526683 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
PUF60-208ENST00000526683 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
PUF60-208ENST00000526683 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
PUF60-208ENST00000526683 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
PUF60-208ENST00000526683 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
PUF60-208ENST00000526683 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
PUF60-208ENST00000526683 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
PUF60-208ENST00000526683 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
PUF60-208ENST00000526683 CFTRP13569 1480 aa25.89■■□□□ 1.73
PUF60-208ENST00000526683 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
PUF60-208ENST00000526683 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
PUF60-208ENST00000526683 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
PUF60-208ENST00000526683 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
PUF60-208ENST00000526683 HRCP23327 699 aa25.69■■□□□ 1.7
PUF60-208ENST00000526683 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
PUF60-208ENST00000526683 NESP48681 1621 aa25.64■■□□□ 1.69
PUF60-208ENST00000526683 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.69
PUF60-208ENST00000526683 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
PUF60-208ENST00000526683 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
PUF60-208ENST00000526683 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
PUF60-208ENST00000526683 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
PUF60-208ENST00000526683 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
PUF60-208ENST00000526683 CUX1P39880 1505 aa25.5■■□□□ 1.67
PUF60-208ENST00000526683 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
PUF60-208ENST00000526683 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
PUF60-208ENST00000526683 SOGA1O94964 1423 aa25.38■■□□□ 1.65
PUF60-208ENST00000526683 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
PUF60-208ENST00000526683 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
PUF60-208ENST00000526683 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
PUF60-208ENST00000526683 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
PUF60-208ENST00000526683 EEA1Q15075 1411 aa25.29■■□□□ 1.64
PUF60-208ENST00000526683 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
PUF60-208ENST00000526683 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
PUF60-208ENST00000526683 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
PUF60-208ENST00000526683 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
PUF60-208ENST00000526683 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
PUF60-208ENST00000526683 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
PUF60-208ENST00000526683 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
PUF60-208ENST00000526683 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
PUF60-208ENST00000526683 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
PUF60-208ENST00000526683 CUX2O14529 1486 aa25.05■■□□□ 1.6
PUF60-208ENST00000526683 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
PUF60-208ENST00000526683 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
PUF60-208ENST00000526683 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
PUF60-208ENST00000526683 KIF21BO75037 1637 aa25■■□□□ 1.59
PUF60-208ENST00000526683 WDR62O43379 1518 aa24.99■■□□□ 1.59
PUF60-208ENST00000526683 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
PUF60-208ENST00000526683 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
PUF60-208ENST00000526683 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
PUF60-208ENST00000526683 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
PUF60-208ENST00000526683 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
PUF60-208ENST00000526683 RAPGEF2Q9Y4G8 1499 aa24.87■■□□□ 1.57
PUF60-208ENST00000526683 IGF1RP08069 1367 aa24.86■■□□□ 1.57
PUF60-208ENST00000526683 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
PUF60-208ENST00000526683 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
PUF60-208ENST00000526683 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
PUF60-208ENST00000526683 ABCA5Q8WWZ7 1642 aa24.82■■□□□ 1.56
PUF60-208ENST00000526683 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
PUF60-208ENST00000526683 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
PUF60-208ENST00000526683 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
PUF60-208ENST00000526683 CARMIL1Q5VZK9 1371 aa24.74■■□□□ 1.55
PUF60-208ENST00000526683 CEP162Q5TB80 1403 aa24.72■■□□□ 1.55
PUF60-208ENST00000526683 CUL7Q14999 1698 aa24.7■■□□□ 1.54
PUF60-208ENST00000526683 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
PUF60-208ENST00000526683 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.548e-7■■■■■ 58
PUF60-208ENST00000526683 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
PUF60-208ENST00000526683 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
PUF60-208ENST00000526683 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
PUF60-208ENST00000526683 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
PUF60-208ENST00000526683 CLIP1P30622 1438 aa24.55■■□□□ 1.52
PUF60-208ENST00000526683 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
PUF60-208ENST00000526683 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
PUF60-208ENST00000526683 TTBK1Q5TCY1 1321 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms