RNA–Protein interactions for RNA: ENST00000450525.6

THRA-203, Transcript of thyroid hormone receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THRA, Length 4,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-203ENST00000450525 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
THRA-203ENST00000450525 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
THRA-203ENST00000450525 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
THRA-203ENST00000450525 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
THRA-203ENST00000450525 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
THRA-203ENST00000450525 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
THRA-203ENST00000450525 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
THRA-203ENST00000450525 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
THRA-203ENST00000450525 ABCC9O60706 1549 aa24.2■■□□□ 1.46
THRA-203ENST00000450525 APLP2Q06481 763 aa24.19■■□□□ 1.46
THRA-203ENST00000450525 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
THRA-203ENST00000450525 ERICH6Q7L0X2 663 aa24.03■■□□□ 1.44
THRA-203ENST00000450525 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
THRA-203ENST00000450525 CCER1Q8TC90 406 aaPredicted RBP23.98■■□□□ 1.43
THRA-203ENST00000450525 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
THRA-203ENST00000450525 MYT1Q01538 1121 aa23.73■■□□□ 1.39
THRA-203ENST00000450525 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
THRA-203ENST00000450525 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
THRA-203ENST00000450525 HRCP23327 699 aa23.45■■□□□ 1.34
THRA-203ENST00000450525 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
THRA-203ENST00000450525 NEFLP07196 543 aa23.41■■□□□ 1.34
THRA-203ENST00000450525 YTHDC1Q96MU7 727 aaKnown RBP23.39■■□□□ 1.33
THRA-203ENST00000450525 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
THRA-203ENST00000450525 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
THRA-203ENST00000450525 ATP1B4Q9UN42 357 aaPredicted RBP23.1■■□□□ 1.29
THRA-203ENST00000450525 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
THRA-203ENST00000450525 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
THRA-203ENST00000450525 DAXXQ9UER7 740 aaPredicted RBP22.92■■□□□ 1.26
THRA-203ENST00000450525 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
THRA-203ENST00000450525 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
THRA-203ENST00000450525 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
THRA-203ENST00000450525 DIEXFQ68CQ4 756 aaKnown RBP22.62■■□□□ 1.21
THRA-203ENST00000450525 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
THRA-203ENST00000450525 NACADO15069 1562 aa22.55■■□□□ 1.2
THRA-203ENST00000450525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
THRA-203ENST00000450525 ITGAEP38570 1179 aa22.53■■□□□ 1.2
THRA-203ENST00000450525 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
THRA-203ENST00000450525 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
THRA-203ENST00000450525 FBLN2P98095 1184 aa22.43■■□□□ 1.18
THRA-203ENST00000450525 POLR3GLQ9BT43 218 aa22.43■■□□□ 1.18
THRA-203ENST00000450525 RTL5Q5HYW3 569 aaPredicted RBP22.4■■□□□ 1.18
THRA-203ENST00000450525 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
THRA-203ENST00000450525 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
THRA-203ENST00000450525 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
THRA-203ENST00000450525 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
THRA-203ENST00000450525 CNGB1Q14028 1251 aaPredicted RBP22.18■■□□□ 1.14
THRA-203ENST00000450525 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
THRA-203ENST00000450525 ACIN1Q9UKV3 1341 aaKnown RBP22.1■■□□□ 1.13
THRA-203ENST00000450525 BCANQ96GW7 911 aa22.09■■□□□ 1.13
THRA-203ENST00000450525 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
THRA-203ENST00000450525 SLC4A1APQ9BWU0 796 aaKnown RBP22.03■■□□□ 1.12
THRA-203ENST00000450525 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
THRA-203ENST00000450525 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
THRA-203ENST00000450525 ANP32CO43423 234 aa21.9■■□□□ 1.1
THRA-203ENST00000450525 NEUROD1Q13562 356 aa21.89■■□□□ 1.1
THRA-203ENST00000450525 ZBTB47Q9UFB7 747 aaPredicted RBP21.8■■□□□ 1.08
THRA-203ENST00000450525 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
THRA-203ENST00000450525 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
THRA-203ENST00000450525 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
THRA-203ENST00000450525 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
THRA-203ENST00000450525 ESF1Q9H501 851 aaKnown RBP21.69■■□□□ 1.06
THRA-203ENST00000450525 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
THRA-203ENST00000450525 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
THRA-203ENST00000450525 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
THRA-203ENST00000450525 ANP32AP39687 249 aaKnown RBP21.57■■□□□ 1.04
THRA-203ENST00000450525 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
THRA-203ENST00000450525 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
THRA-203ENST00000450525 FKBP8Q14318 412 aa21.52■■□□□ 1.04
THRA-203ENST00000450525 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
THRA-203ENST00000450525 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
THRA-203ENST00000450525 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
THRA-203ENST00000450525 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
THRA-203ENST00000450525 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
THRA-203ENST00000450525 NEFMP07197 916 aa21.42■■□□□ 1.02
THRA-203ENST00000450525 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
THRA-203ENST00000450525 BCL11AQ9H165 835 aa21.39■■□□□ 1.02
THRA-203ENST00000450525 SMARCA2P51531 1590 aa21.39■■□□□ 1.02
THRA-203ENST00000450525 NPM2Q86SE8 214 aaKnown RBP21.37■■□□□ 1.01
THRA-203ENST00000450525 SLC24A1O60721 1099 aa21.36■■□□□ 1.01
THRA-203ENST00000450525 ANP32BQ92688 251 aaKnown RBP21.36■■□□□ 1.01
THRA-203ENST00000450525 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
THRA-203ENST00000450525 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
THRA-203ENST00000450525 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
THRA-203ENST00000450525 MIER1Q8N108 512 aa21.22■□□□□ 0.99
THRA-203ENST00000450525 GLIPR1L2Q4G1C9 344 aa21.22■□□□□ 0.99
THRA-203ENST00000450525 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
THRA-203ENST00000450525 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
THRA-203ENST00000450525 HSP90AA1P07900 732 aaKnown RBP21.18■□□□□ 0.98
THRA-203ENST00000450525 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
THRA-203ENST00000450525 NBR1Q14596 966 aa21.11■□□□□ 0.97
THRA-203ENST00000450525 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
THRA-203ENST00000450525 CCDC136Q96JN2 1154 aa21.1■□□□□ 0.97
THRA-203ENST00000450525 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.96
THRA-203ENST00000450525 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
THRA-203ENST00000450525 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
THRA-203ENST00000450525 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
THRA-203ENST00000450525 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
THRA-203ENST00000450525 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.96
THRA-203ENST00000450525 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
THRA-203ENST00000450525 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms