RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
GFAP-233ENST00000639277 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
GFAP-233ENST00000639277 ABCC9O60706 1549 aa30.94■■■□□ 2.54
GFAP-233ENST00000639277 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
GFAP-233ENST00000639277 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
GFAP-233ENST00000639277 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
GFAP-233ENST00000639277 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
GFAP-233ENST00000639277 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
GFAP-233ENST00000639277 NACADO15069 1562 aa29.48■■■□□ 2.31
GFAP-233ENST00000639277 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
GFAP-233ENST00000639277 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
GFAP-233ENST00000639277 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
GFAP-233ENST00000639277 BICRAQ9NZM4 1560 aa28.86■■■□□ 2.21
GFAP-233ENST00000639277 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
GFAP-233ENST00000639277 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
GFAP-233ENST00000639277 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
GFAP-233ENST00000639277 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
GFAP-233ENST00000639277 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
GFAP-233ENST00000639277 CECR2Q9BXF3 1484 aa28.01■■■□□ 2.07
GFAP-233ENST00000639277 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.07
GFAP-233ENST00000639277 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
GFAP-233ENST00000639277 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
GFAP-233ENST00000639277 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
GFAP-233ENST00000639277 WIZO95785 1651 aa27.72■■■□□ 2.03
GFAP-233ENST00000639277 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
GFAP-233ENST00000639277 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
GFAP-233ENST00000639277 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
GFAP-233ENST00000639277 ATAD2BQ9ULI0 1458 aa27.31■■□□□ 1.96
GFAP-233ENST00000639277 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
GFAP-233ENST00000639277 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
GFAP-233ENST00000639277 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
GFAP-233ENST00000639277 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
GFAP-233ENST00000639277 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
GFAP-233ENST00000639277 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
GFAP-233ENST00000639277 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
GFAP-233ENST00000639277 NESP48681 1621 aa26.82■■□□□ 1.88
GFAP-233ENST00000639277 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
GFAP-233ENST00000639277 FAM9AQ8IZU1 332 aaPredicted RBP26.54■■□□□ 1.84
GFAP-233ENST00000639277 ERCC6Q03468 1493 aa26.53■■□□□ 1.84
GFAP-233ENST00000639277 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
GFAP-233ENST00000639277 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
GFAP-233ENST00000639277 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
GFAP-233ENST00000639277 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
GFAP-233ENST00000639277 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
GFAP-233ENST00000639277 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
GFAP-233ENST00000639277 EEA1Q15075 1411 aa26.34■■□□□ 1.81
GFAP-233ENST00000639277 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
GFAP-233ENST00000639277 HRCP23327 699 aa26.33■■□□□ 1.81
GFAP-233ENST00000639277 CFTRP13569 1480 aa26.33■■□□□ 1.81
GFAP-233ENST00000639277 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
GFAP-233ENST00000639277 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
GFAP-233ENST00000639277 SOGA1O94964 1423 aa26.28■■□□□ 1.8
GFAP-233ENST00000639277 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
GFAP-233ENST00000639277 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
GFAP-233ENST00000639277 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
GFAP-233ENST00000639277 CUX2O14529 1486 aa26.24■■□□□ 1.79
GFAP-233ENST00000639277 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
GFAP-233ENST00000639277 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
GFAP-233ENST00000639277 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
GFAP-233ENST00000639277 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
GFAP-233ENST00000639277 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
GFAP-233ENST00000639277 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
GFAP-233ENST00000639277 CUX1P39880 1505 aa26.08■■□□□ 1.77
GFAP-233ENST00000639277 WDR62O43379 1518 aa26.05■■□□□ 1.76
GFAP-233ENST00000639277 KIF21BO75037 1637 aa26.02■■□□□ 1.76
GFAP-233ENST00000639277 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
GFAP-233ENST00000639277 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
GFAP-233ENST00000639277 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
GFAP-233ENST00000639277 CEP162Q5TB80 1403 aa25.89■■□□□ 1.73
GFAP-233ENST00000639277 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
GFAP-233ENST00000639277 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
GFAP-233ENST00000639277 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
GFAP-233ENST00000639277 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
GFAP-233ENST00000639277 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
GFAP-233ENST00000639277 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
GFAP-233ENST00000639277 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
GFAP-233ENST00000639277 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
GFAP-233ENST00000639277 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
GFAP-233ENST00000639277 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.69
GFAP-233ENST00000639277 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
GFAP-233ENST00000639277 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
GFAP-233ENST00000639277 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
GFAP-233ENST00000639277 CLIP1P30622 1438 aa25.57■■□□□ 1.68
GFAP-233ENST00000639277 IFT140Q96RY7 1462 aa25.54■■□□□ 1.68
GFAP-233ENST00000639277 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
GFAP-233ENST00000639277 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
GFAP-233ENST00000639277 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
GFAP-233ENST00000639277 IGF1RP08069 1367 aa25.5■■□□□ 1.67
GFAP-233ENST00000639277 WDR97A6NE52 1622 aa25.45■■□□□ 1.66
GFAP-233ENST00000639277 EIF4G3O43432 1585 aaKnown RBP25.45■■□□□ 1.66
GFAP-233ENST00000639277 AQRO60306 1485 aaKnown RBP eCLIP25.45■■□□□ 1.66
GFAP-233ENST00000639277 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
GFAP-233ENST00000639277 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
GFAP-233ENST00000639277 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
GFAP-233ENST00000639277 CUL7Q14999 1698 aa25.32■■□□□ 1.64
GFAP-233ENST00000639277 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
GFAP-233ENST00000639277 ABCA5Q8WWZ7 1642 aa25.29■■□□□ 1.64
GFAP-233ENST00000639277 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
GFAP-233ENST00000639277 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
GFAP-233ENST00000639277 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms