RNA–Protein interactions for RNA: ENST00000454268.1

AP000344.1-201, humanhuman

TSL 5 BASIC

Gene AP000344.1, Length 641 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000344.1-201ENST00000454268 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
AP000344.1-201ENST00000454268 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
AP000344.1-201ENST00000454268 ABCC9O60706 1549 aa36.62■■■■□ 3.45
AP000344.1-201ENST00000454268 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
AP000344.1-201ENST00000454268 DCAF8L2P0C7V8 631 aa35.37■■■■□ 3.25
AP000344.1-201ENST00000454268 NACADO15069 1562 aa35.35■■■■□ 3.25
AP000344.1-201ENST00000454268 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
AP000344.1-201ENST00000454268 MYO15BQ96JP2 1530 aa35.21■■■■□ 3.23
AP000344.1-201ENST00000454268 DCAF1Q9Y4B6 1507 aa35.15■■■■□ 3.22
AP000344.1-201ENST00000454268 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
AP000344.1-201ENST00000454268 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
AP000344.1-201ENST00000454268 BICRAQ9NZM4 1560 aa34.27■■■■□ 3.08
AP000344.1-201ENST00000454268 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
AP000344.1-201ENST00000454268 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
AP000344.1-201ENST00000454268 DNAJC5BQ9UF47 199 aa33.4■■■□□ 2.94
AP000344.1-201ENST00000454268 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
AP000344.1-201ENST00000454268 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
AP000344.1-201ENST00000454268 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
AP000344.1-201ENST00000454268 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
AP000344.1-201ENST00000454268 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
AP000344.1-201ENST00000454268 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
AP000344.1-201ENST00000454268 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
AP000344.1-201ENST00000454268 SMARCA2P51531 1590 aa32.64■■■□□ 2.82
AP000344.1-201ENST00000454268 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
AP000344.1-201ENST00000454268 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
AP000344.1-201ENST00000454268 HMGXB3Q12766 1538 aa32.47■■■□□ 2.79
AP000344.1-201ENST00000454268 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
AP000344.1-201ENST00000454268 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
AP000344.1-201ENST00000454268 WIZO95785 1651 aa32.4■■■□□ 2.78
AP000344.1-201ENST00000454268 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
AP000344.1-201ENST00000454268 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
AP000344.1-201ENST00000454268 NESP48681 1621 aa31.76■■■□□ 2.67
AP000344.1-201ENST00000454268 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
AP000344.1-201ENST00000454268 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
AP000344.1-201ENST00000454268 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
AP000344.1-201ENST00000454268 ERCC6Q03468 1493 aa31.55■■■□□ 2.64
AP000344.1-201ENST00000454268 CFTRP13569 1480 aa31.52■■■□□ 2.64
AP000344.1-201ENST00000454268 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
AP000344.1-201ENST00000454268 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
AP000344.1-201ENST00000454268 PRDM2Q13029 1718 aa31.36■■■□□ 2.61
AP000344.1-201ENST00000454268 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
AP000344.1-201ENST00000454268 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
AP000344.1-201ENST00000454268 THOC2Q8NI27 1593 aaKnown RBP31.24■■■□□ 2.59
AP000344.1-201ENST00000454268 MRC2Q9UBG0 1479 aa31.15■■■□□ 2.58
AP000344.1-201ENST00000454268 CUX2O14529 1486 aa31.14■■■□□ 2.57
AP000344.1-201ENST00000454268 WDR62O43379 1518 aa31.04■■■□□ 2.56
AP000344.1-201ENST00000454268 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
AP000344.1-201ENST00000454268 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
AP000344.1-201ENST00000454268 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
AP000344.1-201ENST00000454268 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
AP000344.1-201ENST00000454268 CUX1P39880 1505 aa30.69■■■□□ 2.5
AP000344.1-201ENST00000454268 POLA1P09884 1462 aaPredicted RBP30.58■■■□□ 2.49
AP000344.1-201ENST00000454268 IFT140Q96RY7 1462 aa30.58■■■□□ 2.49
AP000344.1-201ENST00000454268 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
AP000344.1-201ENST00000454268 FGD5Q6ZNL6 1462 aa30.55■■■□□ 2.48
AP000344.1-201ENST00000454268 TARBP1Q13395 1621 aaKnown RBP30.5■■■□□ 2.47
AP000344.1-201ENST00000454268 BIVM-ERCC5R4GMW8 1640 aa30.5■■■□□ 2.47
AP000344.1-201ENST00000454268 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
AP000344.1-201ENST00000454268 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
AP000344.1-201ENST00000454268 SOGA1O94964 1423 aa30.47■■■□□ 2.47
AP000344.1-201ENST00000454268 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
AP000344.1-201ENST00000454268 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
AP000344.1-201ENST00000454268 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
AP000344.1-201ENST00000454268 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
AP000344.1-201ENST00000454268 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
AP000344.1-201ENST00000454268 TDRD9Q8NDG6 1382 aaKnown RBP30.27■■■□□ 2.44
AP000344.1-201ENST00000454268 ABCA10Q8WWZ4 1543 aa30.26■■■□□ 2.43
AP000344.1-201ENST00000454268 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
AP000344.1-201ENST00000454268 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
AP000344.1-201ENST00000454268 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
AP000344.1-201ENST00000454268 PBRM1Q86U86 1689 aa30.07■■■□□ 2.41
AP000344.1-201ENST00000454268 SNAPC4Q5SXM2 1469 aa30.01■■■□□ 2.4
AP000344.1-201ENST00000454268 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
AP000344.1-201ENST00000454268 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
AP000344.1-201ENST00000454268 CHD1O14646 1710 aa29.93■■■□□ 2.38
AP000344.1-201ENST00000454268 DNAJC5Q9H3Z4 198 aa29.92■■■□□ 2.38
AP000344.1-201ENST00000454268 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
AP000344.1-201ENST00000454268 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
AP000344.1-201ENST00000454268 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
AP000344.1-201ENST00000454268 FBLN2P98095 1184 aa29.87■■■□□ 2.37
AP000344.1-201ENST00000454268 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
AP000344.1-201ENST00000454268 CHMP7Q8WUX9 453 aaPredicted RBP29.83■■■□□ 2.37
AP000344.1-201ENST00000454268 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
AP000344.1-201ENST00000454268 FHAD1B1AJZ9 1412 aa29.78■■■□□ 2.36
AP000344.1-201ENST00000454268 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
AP000344.1-201ENST00000454268 IGF1RP08069 1367 aa29.77■■■□□ 2.36
AP000344.1-201ENST00000454268 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
AP000344.1-201ENST00000454268 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
AP000344.1-201ENST00000454268 CUL7Q14999 1698 aa29.69■■■□□ 2.34
AP000344.1-201ENST00000454268 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
AP000344.1-201ENST00000454268 CLASP1Q7Z460 1538 aa29.58■■■□□ 2.33
AP000344.1-201ENST00000454268 NUP160Q12769 1436 aa29.55■■■□□ 2.32
AP000344.1-201ENST00000454268 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
AP000344.1-201ENST00000454268 EEA1Q15075 1411 aa29.49■■■□□ 2.31
AP000344.1-201ENST00000454268 RAPGEF2Q9Y4G8 1499 aa29.45■■■□□ 2.31
AP000344.1-201ENST00000454268 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
AP000344.1-201ENST00000454268 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
AP000344.1-201ENST00000454268 RIMBP3CA6NJZ7 1639 aa29.4■■■□□ 2.3
AP000344.1-201ENST00000454268 RIMBP3BA6NNM3 1639 aa29.4■■■□□ 2.3
AP000344.1-201ENST00000454268 RIMBP3Q9UFD9 1639 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms