RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 PELP1Q8IZL8 1130 aaKnown RBP24.86■■□□□ 1.57
APAF1-203ENST00000359972 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
APAF1-203ENST00000359972 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.46
APAF1-203ENST00000359972 MYT1Q01538 1121 aa24.12■■□□□ 1.45
APAF1-203ENST00000359972 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
APAF1-203ENST00000359972 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
APAF1-203ENST00000359972 CENPBP07199 599 aaPredicted RBP23.73■■□□□ 1.39
APAF1-203ENST00000359972 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
APAF1-203ENST00000359972 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
APAF1-203ENST00000359972 YTHDC1Q96MU7 727 aaKnown RBP23.35■■□□□ 1.33
APAF1-203ENST00000359972 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
APAF1-203ENST00000359972 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
APAF1-203ENST00000359972 APLP2Q06481 763 aa23.14■■□□□ 1.29
APAF1-203ENST00000359972 NEFLP07196 543 aa23.11■■□□□ 1.29
APAF1-203ENST00000359972 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
APAF1-203ENST00000359972 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
APAF1-203ENST00000359972 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
APAF1-203ENST00000359972 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
APAF1-203ENST00000359972 HRCP23327 699 aa22.43■■□□□ 1.18
APAF1-203ENST00000359972 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
APAF1-203ENST00000359972 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
APAF1-203ENST00000359972 ATP1B4Q9UN42 357 aaPredicted RBP22.22■■□□□ 1.15
APAF1-203ENST00000359972 ZNF316A6NFI3 1004 aaPredicted RBP22.18■■□□□ 1.14
APAF1-203ENST00000359972 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
APAF1-203ENST00000359972 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
APAF1-203ENST00000359972 GTF3C3Q9Y5Q9 886 aa22.03■■□□□ 1.12
APAF1-203ENST00000359972 BCANQ96GW7 911 aa22■■□□□ 1.11
APAF1-203ENST00000359972 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
APAF1-203ENST00000359972 POLR3GLQ9BT43 218 aa21.99■■□□□ 1.11
APAF1-203ENST00000359972 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
APAF1-203ENST00000359972 EIF5BO60841 1220 aaKnown RBP21.93■■□□□ 1.1
APAF1-203ENST00000359972 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.1
APAF1-203ENST00000359972 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
APAF1-203ENST00000359972 ITGAEP38570 1179 aa21.7■■□□□ 1.07
APAF1-203ENST00000359972 CDK11AQ9UQ88 783 aaPredicted RBP21.67■■□□□ 1.06
APAF1-203ENST00000359972 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
APAF1-203ENST00000359972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
APAF1-203ENST00000359972 HNRNPUL2Q1KMD3 747 aaKnown RBP21.6■■□□□ 1.05
APAF1-203ENST00000359972 GLIPR1L2Q4G1C9 344 aa21.55■■□□□ 1.04
APAF1-203ENST00000359972 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
APAF1-203ENST00000359972 ACIN1Q9UKV3 1341 aaKnown RBP21.46■■□□□ 1.03
APAF1-203ENST00000359972 NPM2Q86SE8 214 aaKnown RBP21.37■■□□□ 1.01
APAF1-203ENST00000359972 ANP32AP39687 249 aaKnown RBP21.36■■□□□ 1.01
APAF1-203ENST00000359972 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
APAF1-203ENST00000359972 NBR1Q14596 966 aa21.26■□□□□ 0.99
APAF1-203ENST00000359972 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
APAF1-203ENST00000359972 ANP32CO43423 234 aa21.15■□□□□ 0.98
APAF1-203ENST00000359972 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
APAF1-203ENST00000359972 ANP32BQ92688 251 aaKnown RBP21.1■□□□□ 0.97
APAF1-203ENST00000359972 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
APAF1-203ENST00000359972 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
APAF1-203ENST00000359972 ARXQ96QS3 562 aa21.09■□□□□ 0.97
APAF1-203ENST00000359972 FKBP8Q14318 412 aa21.08■□□□□ 0.96
APAF1-203ENST00000359972 ZBTB47Q9UFB7 747 aaPredicted RBP21.05■□□□□ 0.96
APAF1-203ENST00000359972 CANXP27824 592 aaKnown RBP21■□□□□ 0.95
APAF1-203ENST00000359972 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
APAF1-203ENST00000359972 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
APAF1-203ENST00000359972 HSP90AA1P07900 732 aaKnown RBP20.83■□□□□ 0.93
APAF1-203ENST00000359972 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
APAF1-203ENST00000359972 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
APAF1-203ENST00000359972 ZNF326Q5BKZ1 582 aaKnown RBP20.79■□□□□ 0.92
APAF1-203ENST00000359972 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
APAF1-203ENST00000359972 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
APAF1-203ENST00000359972 TNNT2P45379 298 aaPredicted RBP20.65■□□□□ 0.9
APAF1-203ENST00000359972 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
APAF1-203ENST00000359972 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
APAF1-203ENST00000359972 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
APAF1-203ENST00000359972 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
APAF1-203ENST00000359972 NAP1L5Q96NT1 182 aaPredicted RBP20.57■□□□□ 0.88
APAF1-203ENST00000359972 CCDC136Q96JN2 1154 aa20.56■□□□□ 0.88
APAF1-203ENST00000359972 TRIM44Q96DX7 344 aaPredicted RBP20.55■□□□□ 0.88
APAF1-203ENST00000359972 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
APAF1-203ENST00000359972 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
APAF1-203ENST00000359972 CDK11BP21127 795 aaKnown RBP20.47■□□□□ 0.87
APAF1-203ENST00000359972 NEFMP07197 916 aa20.43■□□□□ 0.86
APAF1-203ENST00000359972 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
APAF1-203ENST00000359972 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
APAF1-203ENST00000359972 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
APAF1-203ENST00000359972 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
APAF1-203ENST00000359972 MIER1Q8N108 512 aa20.32■□□□□ 0.84
APAF1-203ENST00000359972 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
APAF1-203ENST00000359972 DDRGK1Q96HY6 314 aa20.31■□□□□ 0.84
APAF1-203ENST00000359972 PTMAP06454 111 aaKnown RBP20.28■□□□□ 0.84
APAF1-203ENST00000359972 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
APAF1-203ENST00000359972 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
APAF1-203ENST00000359972 DEKP35659 375 aaKnown RBP20.25■□□□□ 0.83
APAF1-203ENST00000359972 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
APAF1-203ENST00000359972 BECN1Q14457 450 aa20.21■□□□□ 0.83
APAF1-203ENST00000359972 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
APAF1-203ENST00000359972 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
APAF1-203ENST00000359972 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
APAF1-203ENST00000359972 GOLGA6L22H0YM25 854 aa20.12■□□□□ 0.81
APAF1-203ENST00000359972 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
APAF1-203ENST00000359972 ARID3AQ99856 593 aa20.1■□□□□ 0.81
APAF1-203ENST00000359972 MRS2Q9HD23 443 aa20.07■□□□□ 0.8
APAF1-203ENST00000359972 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
APAF1-203ENST00000359972 PLCB2Q00722 1185 aa20.02■□□□□ 0.8
APAF1-203ENST00000359972 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
APAF1-203ENST00000359972 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
APAF1-203ENST00000359972 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms