RNA–Protein interactions for RNA: ENST00000590729.5

LONP1-213, Transcript of lon peptidase 1, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene LONP1, Length 2,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONP1-213ENST00000590729 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
LONP1-213ENST00000590729 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
LONP1-213ENST00000590729 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
LONP1-213ENST00000590729 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
LONP1-213ENST00000590729 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
LONP1-213ENST00000590729 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
LONP1-213ENST00000590729 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
LONP1-213ENST00000590729 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
LONP1-213ENST00000590729 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
LONP1-213ENST00000590729 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
LONP1-213ENST00000590729 PCGF6Q9BYE7 350 aa26.07■■□□□ 1.76
LONP1-213ENST00000590729 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
LONP1-213ENST00000590729 HRCP23327 699 aa25.84■■□□□ 1.73
LONP1-213ENST00000590729 ABCC9O60706 1549 aa25.82■■□□□ 1.72
LONP1-213ENST00000590729 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
LONP1-213ENST00000590729 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
LONP1-213ENST00000590729 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
LONP1-213ENST00000590729 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
LONP1-213ENST00000590729 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
LONP1-213ENST00000590729 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
LONP1-213ENST00000590729 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
LONP1-213ENST00000590729 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
LONP1-213ENST00000590729 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
LONP1-213ENST00000590729 WIZO95785 1651 aa25.23■■□□□ 1.63
LONP1-213ENST00000590729 NACADO15069 1562 aa25.22■■□□□ 1.63
LONP1-213ENST00000590729 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.571e-7■■□□□ 11.8
LONP1-213ENST00000590729 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.57
LONP1-213ENST00000590729 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
LONP1-213ENST00000590729 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
LONP1-213ENST00000590729 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
LONP1-213ENST00000590729 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
LONP1-213ENST00000590729 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
LONP1-213ENST00000590729 SMARCA4P51532 1647 aa24.64■■□□□ 1.54
LONP1-213ENST00000590729 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
LONP1-213ENST00000590729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.58■■□□□ 1.52
LONP1-213ENST00000590729 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
LONP1-213ENST00000590729 SOGA1O94964 1423 aa24.56■■□□□ 1.52
LONP1-213ENST00000590729 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
LONP1-213ENST00000590729 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
LONP1-213ENST00000590729 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
LONP1-213ENST00000590729 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
LONP1-213ENST00000590729 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
LONP1-213ENST00000590729 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
LONP1-213ENST00000590729 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
LONP1-213ENST00000590729 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
LONP1-213ENST00000590729 WRNQ14191 1432 aaPredicted RBP eCLIP24.16■■□□□ 1.46
LONP1-213ENST00000590729 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
LONP1-213ENST00000590729 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
LONP1-213ENST00000590729 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
LONP1-213ENST00000590729 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
LONP1-213ENST00000590729 GOLGA3Q08378 1498 aa24.01■■□□□ 1.43
LONP1-213ENST00000590729 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
LONP1-213ENST00000590729 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
LONP1-213ENST00000590729 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
LONP1-213ENST00000590729 EEA1Q15075 1411 aa23.95■■□□□ 1.42
LONP1-213ENST00000590729 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
LONP1-213ENST00000590729 CLIP1P30622 1438 aa23.85■■□□□ 1.41
LONP1-213ENST00000590729 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
LONP1-213ENST00000590729 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.41
LONP1-213ENST00000590729 NEUROD1Q13562 356 aa23.76■■□□□ 1.39
LONP1-213ENST00000590729 KIF21BO75037 1637 aa23.73■■□□□ 1.39
LONP1-213ENST00000590729 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
LONP1-213ENST00000590729 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
LONP1-213ENST00000590729 APLP2Q06481 763 aa23.65■■□□□ 1.38
LONP1-213ENST00000590729 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
LONP1-213ENST00000590729 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
LONP1-213ENST00000590729 YTHDC1Q96MU7 727 aaKnown RBP23.58■■□□□ 1.37
LONP1-213ENST00000590729 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
LONP1-213ENST00000590729 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
LONP1-213ENST00000590729 CUX1P39880 1505 aa23.54■■□□□ 1.36
LONP1-213ENST00000590729 GTF3C3Q9Y5Q9 886 aa23.48■■□□□ 1.35
LONP1-213ENST00000590729 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
LONP1-213ENST00000590729 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
LONP1-213ENST00000590729 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
LONP1-213ENST00000590729 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
LONP1-213ENST00000590729 ITGAEP38570 1179 aa23.43■■□□□ 1.34
LONP1-213ENST00000590729 MIER1Q8N108 512 aa23.43■■□□□ 1.34
LONP1-213ENST00000590729 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
LONP1-213ENST00000590729 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
LONP1-213ENST00000590729 CFTRP13569 1480 aa23.33■■□□□ 1.33
LONP1-213ENST00000590729 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
LONP1-213ENST00000590729 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
LONP1-213ENST00000590729 P3H3Q8IVL6 736 aa23.26■■□□□ 1.31
LONP1-213ENST00000590729 CUX2O14529 1486 aa23.26■■□□□ 1.31
LONP1-213ENST00000590729 ARHGAP35Q9NRY4 1499 aa23.26■■□□□ 1.31
LONP1-213ENST00000590729 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
LONP1-213ENST00000590729 IGF1RP08069 1367 aa23.19■■□□□ 1.3
LONP1-213ENST00000590729 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
LONP1-213ENST00000590729 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
LONP1-213ENST00000590729 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
LONP1-213ENST00000590729 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
LONP1-213ENST00000590729 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.29
LONP1-213ENST00000590729 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
LONP1-213ENST00000590729 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
LONP1-213ENST00000590729 NESP48681 1621 aa23.02■■□□□ 1.28
LONP1-213ENST00000590729 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
LONP1-213ENST00000590729 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
LONP1-213ENST00000590729 PHLDB1Q86UU1 1377 aa22.97■■□□□ 1.27
LONP1-213ENST00000590729 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
LONP1-213ENST00000590729 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms