RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 NISCHQ9Y2I1 1504 aa42.02■■■■■ 4.32
CD9-202ENST00000382515 CCDC180Q9P1Z9 1646 aa37.08■■■■□ 3.53
CD9-202ENST00000382515 ABCC9O60706 1549 aa36.03■■■■□ 3.36
CD9-202ENST00000382515 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
CD9-202ENST00000382515 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
CD9-202ENST00000382515 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
CD9-202ENST00000382515 NACADO15069 1562 aa34.95■■■■□ 3.18
CD9-202ENST00000382515 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
CD9-202ENST00000382515 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
CD9-202ENST00000382515 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
CD9-202ENST00000382515 SCRIBQ14160 1630 aa33.79■■■■□ 3
CD9-202ENST00000382515 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
CD9-202ENST00000382515 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
CD9-202ENST00000382515 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
CD9-202ENST00000382515 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
CD9-202ENST00000382515 EIF4G1Q04637 1599 aaKnown RBP32.82■■■□□ 2.84
CD9-202ENST00000382515 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
CD9-202ENST00000382515 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
CD9-202ENST00000382515 BAZ1AQ9NRL2 1556 aaPredicted RBP32.55■■■□□ 2.8
CD9-202ENST00000382515 SMARCA4P51532 1647 aa32.42■■■□□ 2.78
CD9-202ENST00000382515 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
CD9-202ENST00000382515 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
CD9-202ENST00000382515 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
CD9-202ENST00000382515 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
CD9-202ENST00000382515 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
CD9-202ENST00000382515 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
CD9-202ENST00000382515 HMGXB3Q12766 1538 aa32.06■■■□□ 2.72
CD9-202ENST00000382515 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
CD9-202ENST00000382515 WIZO95785 1651 aa31.88■■■□□ 2.69
CD9-202ENST00000382515 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
CD9-202ENST00000382515 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
CD9-202ENST00000382515 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
CD9-202ENST00000382515 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
CD9-202ENST00000382515 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
CD9-202ENST00000382515 CFTRP13569 1480 aa31.23■■■□□ 2.59
CD9-202ENST00000382515 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
CD9-202ENST00000382515 NESP48681 1621 aa31.22■■■□□ 2.59
CD9-202ENST00000382515 ERCC6Q03468 1493 aa31.1■■■□□ 2.57
CD9-202ENST00000382515 FANCD2Q9BXW9 1451 aa30.94■■■□□ 2.54
CD9-202ENST00000382515 CEP164Q9UPV0 1460 aa30.86■■■□□ 2.53
CD9-202ENST00000382515 MRC2Q9UBG0 1479 aa30.75■■■□□ 2.51
CD9-202ENST00000382515 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
CD9-202ENST00000382515 CUX2O14529 1486 aa30.7■■■□□ 2.51
CD9-202ENST00000382515 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
CD9-202ENST00000382515 ABCC8Q09428 1581 aa30.64■■■□□ 2.5
CD9-202ENST00000382515 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
CD9-202ENST00000382515 WDR62O43379 1518 aa30.58■■■□□ 2.49
CD9-202ENST00000382515 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
CD9-202ENST00000382515 TOPBP1Q92547 1522 aa30.44■■■□□ 2.46
CD9-202ENST00000382515 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
CD9-202ENST00000382515 WRNQ14191 1432 aaPredicted RBP eCLIP30.34■■■□□ 2.45
CD9-202ENST00000382515 CUX1P39880 1505 aa30.28■■■□□ 2.44
CD9-202ENST00000382515 IFT140Q96RY7 1462 aa30.26■■■□□ 2.44
CD9-202ENST00000382515 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
CD9-202ENST00000382515 SOGA1O94964 1423 aa30.21■■■□□ 2.43
CD9-202ENST00000382515 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
CD9-202ENST00000382515 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
CD9-202ENST00000382515 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
CD9-202ENST00000382515 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
CD9-202ENST00000382515 SYNJ1O43426 1573 aa30.05■■■□□ 2.4
CD9-202ENST00000382515 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
CD9-202ENST00000382515 TRIM41Q8WV44 630 aa29.97■■■□□ 2.39
CD9-202ENST00000382515 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
CD9-202ENST00000382515 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
CD9-202ENST00000382515 TDRD9Q8NDG6 1382 aaKnown RBP29.95■■■□□ 2.39
CD9-202ENST00000382515 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
CD9-202ENST00000382515 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
CD9-202ENST00000382515 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
CD9-202ENST00000382515 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
CD9-202ENST00000382515 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
CD9-202ENST00000382515 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
CD9-202ENST00000382515 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
CD9-202ENST00000382515 ABCA5Q8WWZ7 1642 aa29.66■■■□□ 2.34
CD9-202ENST00000382515 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
CD9-202ENST00000382515 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
CD9-202ENST00000382515 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
CD9-202ENST00000382515 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
CD9-202ENST00000382515 IGF1RP08069 1367 aa29.6■■■□□ 2.33
CD9-202ENST00000382515 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
CD9-202ENST00000382515 FBLN2P98095 1184 aa29.58■■■□□ 2.33
CD9-202ENST00000382515 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
CD9-202ENST00000382515 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
CD9-202ENST00000382515 DNAJC5Q9H3Z4 198 aa29.51■■■□□ 2.31
CD9-202ENST00000382515 PBRM1Q86U86 1689 aa29.45■■■□□ 2.31
CD9-202ENST00000382515 EEA1Q15075 1411 aa29.45■■■□□ 2.3
CD9-202ENST00000382515 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
CD9-202ENST00000382515 CSRNP3Q8WYN3 585 aa29.39■■■□□ 2.3
CD9-202ENST00000382515 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
CD9-202ENST00000382515 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
CD9-202ENST00000382515 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
CD9-202ENST00000382515 CUL7Q14999 1698 aa29.3■■■□□ 2.28
CD9-202ENST00000382515 NUP160Q12769 1436 aa29.24■■■□□ 2.27
CD9-202ENST00000382515 RAPGEF2Q9Y4G8 1499 aa29.23■■■□□ 2.27
CD9-202ENST00000382515 CHD1O14646 1710 aa29.23■■■□□ 2.27
CD9-202ENST00000382515 PRXQ9BXM0 1461 aa29.2■■■□□ 2.26
CD9-202ENST00000382515 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
CD9-202ENST00000382515 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
CD9-202ENST00000382515 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
CD9-202ENST00000382515 JPH4Q96JJ6 628 aa29.09■■■□□ 2.25
CD9-202ENST00000382515 CEP170Q5SW79 1584 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms