RNA–Protein interactions for RNA: ENST00000584031.5

CYB561-219, Transcript of cytochrome b561, humanhuman

TSL 2 BASIC

Gene CYB561, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-219ENST00000584031 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
CYB561-219ENST00000584031 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
CYB561-219ENST00000584031 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
CYB561-219ENST00000584031 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
CYB561-219ENST00000584031 PCGF6Q9BYE7 350 aa25.28■■□□□ 1.64
CYB561-219ENST00000584031 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.62
CYB561-219ENST00000584031 HRCP23327 699 aa25.14■■□□□ 1.62
CYB561-219ENST00000584031 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
CYB561-219ENST00000584031 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
CYB561-219ENST00000584031 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
CYB561-219ENST00000584031 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
CYB561-219ENST00000584031 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
CYB561-219ENST00000584031 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
CYB561-219ENST00000584031 TRIM26Q12899 539 aaPredicted RBP24.1■■□□□ 1.45
CYB561-219ENST00000584031 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
CYB561-219ENST00000584031 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
CYB561-219ENST00000584031 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
CYB561-219ENST00000584031 TTBK1Q5TCY1 1321 aaPredicted RBP23.77■■□□□ 1.4
CYB561-219ENST00000584031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
CYB561-219ENST00000584031 ZEB1P37275 1124 aaPredicted RBP23.58■■□□□ 1.37
CYB561-219ENST00000584031 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
CYB561-219ENST00000584031 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
CYB561-219ENST00000584031 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.34
CYB561-219ENST00000584031 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
CYB561-219ENST00000584031 GTF3C3Q9Y5Q9 886 aa23.23■■□□□ 1.31
CYB561-219ENST00000584031 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
CYB561-219ENST00000584031 ACIN1Q9UKV3 1341 aaKnown RBP23.18■■□□□ 1.3
CYB561-219ENST00000584031 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
CYB561-219ENST00000584031 DIEXFQ68CQ4 756 aaKnown RBP23.13■■□□□ 1.29
CYB561-219ENST00000584031 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
CYB561-219ENST00000584031 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
CYB561-219ENST00000584031 CENPBP07199 599 aaPredicted RBP22.98■■□□□ 1.27
CYB561-219ENST00000584031 ABCC9O60706 1549 aa22.93■■□□□ 1.26
CYB561-219ENST00000584031 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
CYB561-219ENST00000584031 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
CYB561-219ENST00000584031 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
CYB561-219ENST00000584031 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
CYB561-219ENST00000584031 MIER1Q8N108 512 aa22.64■■□□□ 1.21
CYB561-219ENST00000584031 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
CYB561-219ENST00000584031 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
CYB561-219ENST00000584031 WIZO95785 1651 aa22.48■■□□□ 1.19
CYB561-219ENST00000584031 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
CYB561-219ENST00000584031 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
CYB561-219ENST00000584031 SOGA1O94964 1423 aa22.44■■□□□ 1.18
CYB561-219ENST00000584031 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
CYB561-219ENST00000584031 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
CYB561-219ENST00000584031 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
CYB561-219ENST00000584031 APLP2Q06481 763 aa22.29■■□□□ 1.16
CYB561-219ENST00000584031 MYT1Q01538 1121 aa22.2■■□□□ 1.14
CYB561-219ENST00000584031 ITGAEP38570 1179 aa22.18■■□□□ 1.14
CYB561-219ENST00000584031 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
CYB561-219ENST00000584031 BCANQ96GW7 911 aa22.15■■□□□ 1.14
CYB561-219ENST00000584031 TNIKQ9UKE5 1360 aa22.14■■□□□ 1.13
CYB561-219ENST00000584031 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.139e-6■■■■■ 50.1
CYB561-219ENST00000584031 SUPT16HQ9Y5B9 1047 aaKnown RBP22.01■■□□□ 1.11
CYB561-219ENST00000584031 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
CYB561-219ENST00000584031 BAZ1AQ9NRL2 1556 aaPredicted RBP21.97■■□□□ 1.11
CYB561-219ENST00000584031 CLIP1P30622 1438 aa21.95■■□□□ 1.1
CYB561-219ENST00000584031 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
CYB561-219ENST00000584031 NACADO15069 1562 aa21.88■■□□□ 1.09
CYB561-219ENST00000584031 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
CYB561-219ENST00000584031 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
CYB561-219ENST00000584031 KANK4Q5T7N3 995 aaPredicted RBP21.83■■□□□ 1.09
CYB561-219ENST00000584031 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
CYB561-219ENST00000584031 TSHZ2Q9NRE2 1034 aa21.81■■□□□ 1.08
CYB561-219ENST00000584031 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
CYB561-219ENST00000584031 FKBP8Q14318 412 aa21.74■■□□□ 1.07
CYB561-219ENST00000584031 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
CYB561-219ENST00000584031 DDX10Q13206 875 aaKnown RBP21.72■■□□□ 1.07
CYB561-219ENST00000584031 EEA1Q15075 1411 aa21.72■■□□□ 1.07
CYB561-219ENST00000584031 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
CYB561-219ENST00000584031 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
CYB561-219ENST00000584031 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
CYB561-219ENST00000584031 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
CYB561-219ENST00000584031 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
CYB561-219ENST00000584031 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
CYB561-219ENST00000584031 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
CYB561-219ENST00000584031 ANP32EQ9BTT0 268 aa21.6■■□□□ 1.05
CYB561-219ENST00000584031 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
CYB561-219ENST00000584031 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
CYB561-219ENST00000584031 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
CYB561-219ENST00000584031 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
CYB561-219ENST00000584031 KIF21BO75037 1637 aa21.5■■□□□ 1.03
CYB561-219ENST00000584031 NEFLP07196 543 aa21.5■■□□□ 1.03
CYB561-219ENST00000584031 BCL11AQ9H165 835 aa21.44■■□□□ 1.02
CYB561-219ENST00000584031 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
CYB561-219ENST00000584031 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
CYB561-219ENST00000584031 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
CYB561-219ENST00000584031 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
CYB561-219ENST00000584031 CNGB1Q14028 1251 aaPredicted RBP21.36■■□□□ 1.01
CYB561-219ENST00000584031 ARAP1Q96P48 1450 aa21.33■■□□□ 1
CYB561-219ENST00000584031 ANP32CO43423 234 aa21.29■■□□□ 1
CYB561-219ENST00000584031 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
CYB561-219ENST00000584031 SENP3-EIF4A1A0A087X0R7 540 aa21.23■□□□□ 0.99
CYB561-219ENST00000584031 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
CYB561-219ENST00000584031 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
CYB561-219ENST00000584031 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
CYB561-219ENST00000584031 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
CYB561-219ENST00000584031 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
CYB561-219ENST00000584031 MSH5O43196 834 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms