RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 NISCHQ9Y2I1 1504 aa42.67■■■■■ 4.42
PCCB-207ENST00000466072 CCDC180Q9P1Z9 1646 aa37.78■■■■□ 3.64
PCCB-207ENST00000466072 ABCC9O60706 1549 aa37.18■■■■□ 3.54
PCCB-207ENST00000466072 DCAF8L2P0C7V8 631 aa35.8■■■■□ 3.32
PCCB-207ENST00000466072 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
PCCB-207ENST00000466072 NACADO15069 1562 aa35.56■■■■□ 3.28
PCCB-207ENST00000466072 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
PCCB-207ENST00000466072 MYO15BQ96JP2 1530 aa35.3■■■■□ 3.24
PCCB-207ENST00000466072 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
PCCB-207ENST00000466072 UNC13AQ9UPW8 1703 aa34.86■■■■□ 3.17
PCCB-207ENST00000466072 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
PCCB-207ENST00000466072 SCRIBQ14160 1630 aa34.65■■■■□ 3.14
PCCB-207ENST00000466072 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
PCCB-207ENST00000466072 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
PCCB-207ENST00000466072 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
PCCB-207ENST00000466072 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
PCCB-207ENST00000466072 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
PCCB-207ENST00000466072 CECR2Q9BXF3 1484 aa33.36■■■□□ 2.93
PCCB-207ENST00000466072 SMARCA4P51532 1647 aa33.08■■■□□ 2.89
PCCB-207ENST00000466072 BAZ1AQ9NRL2 1556 aaPredicted RBP33.01■■■□□ 2.87
PCCB-207ENST00000466072 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
PCCB-207ENST00000466072 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
PCCB-207ENST00000466072 NCAPD3P42695 1498 aa32.88■■■□□ 2.85
PCCB-207ENST00000466072 SMARCA2P51531 1590 aa32.8■■■□□ 2.84
PCCB-207ENST00000466072 PEG3Q9GZU2 1588 aa32.7■■■□□ 2.83
PCCB-207ENST00000466072 HMGXB3Q12766 1538 aa32.65■■■□□ 2.82
PCCB-207ENST00000466072 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
PCCB-207ENST00000466072 WIZO95785 1651 aa32.59■■■□□ 2.81
PCCB-207ENST00000466072 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.81
PCCB-207ENST00000466072 NESP48681 1621 aa32.22■■■□□ 2.75
PCCB-207ENST00000466072 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
PCCB-207ENST00000466072 ERCC6Q03468 1493 aa31.95■■■□□ 2.71
PCCB-207ENST00000466072 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
PCCB-207ENST00000466072 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
PCCB-207ENST00000466072 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
PCCB-207ENST00000466072 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
PCCB-207ENST00000466072 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.67
PCCB-207ENST00000466072 CFTRP13569 1480 aa31.75■■■□□ 2.67
PCCB-207ENST00000466072 KIF21AQ7Z4S6 1674 aa31.72■■■□□ 2.67
PCCB-207ENST00000466072 THOC2Q8NI27 1593 aaKnown RBP31.59■■■□□ 2.65
PCCB-207ENST00000466072 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
PCCB-207ENST00000466072 CUX2O14529 1486 aa31.54■■■□□ 2.64
PCCB-207ENST00000466072 CEP164Q9UPV0 1460 aa31.51■■■□□ 2.63
PCCB-207ENST00000466072 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
PCCB-207ENST00000466072 PRDM2Q13029 1718 aa31.37■■■□□ 2.61
PCCB-207ENST00000466072 WDR62O43379 1518 aa31.34■■■□□ 2.61
PCCB-207ENST00000466072 URB2Q14146 1524 aaKnown RBP31.31■■■□□ 2.6
PCCB-207ENST00000466072 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
PCCB-207ENST00000466072 DNMBPQ6XZF7 1577 aa30.99■■■□□ 2.55
PCCB-207ENST00000466072 ABCC8Q09428 1581 aa30.95■■■□□ 2.55
PCCB-207ENST00000466072 CUX1P39880 1505 aa30.89■■■□□ 2.54
PCCB-207ENST00000466072 POLA1P09884 1462 aaPredicted RBP30.83■■■□□ 2.53
PCCB-207ENST00000466072 IFT140Q96RY7 1462 aa30.83■■■□□ 2.53
PCCB-207ENST00000466072 ZNF608Q9ULD9 1512 aaPredicted RBP30.82■■■□□ 2.52
PCCB-207ENST00000466072 RAD54L2Q9Y4B4 1467 aa30.77■■■□□ 2.52
PCCB-207ENST00000466072 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.52
PCCB-207ENST00000466072 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
PCCB-207ENST00000466072 SOGA1O94964 1423 aa30.71■■■□□ 2.51
PCCB-207ENST00000466072 DNAJC5Q9H3Z4 198 aa30.68■■■□□ 2.5
PCCB-207ENST00000466072 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
PCCB-207ENST00000466072 AQRO60306 1485 aaKnown RBP eCLIP30.65■■■□□ 2.52e-6■■■■□ 22.2
PCCB-207ENST00000466072 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
PCCB-207ENST00000466072 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
PCCB-207ENST00000466072 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
PCCB-207ENST00000466072 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
PCCB-207ENST00000466072 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
PCCB-207ENST00000466072 WDR97A6NE52 1622 aa30.43■■■□□ 2.46
PCCB-207ENST00000466072 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
PCCB-207ENST00000466072 OSCARQ8IYS5 282 aa30.33■■■□□ 2.45
PCCB-207ENST00000466072 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
PCCB-207ENST00000466072 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
PCCB-207ENST00000466072 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
PCCB-207ENST00000466072 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
PCCB-207ENST00000466072 FBLN2P98095 1184 aa30.29■■■□□ 2.44
PCCB-207ENST00000466072 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
PCCB-207ENST00000466072 CHD1O14646 1710 aa30.2■■■□□ 2.43
PCCB-207ENST00000466072 MAGI1Q96QZ7 1491 aaPredicted RBP30.18■■■□□ 2.42
PCCB-207ENST00000466072 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
PCCB-207ENST00000466072 SYNJ2O15056 1496 aa30.1■■■□□ 2.41
PCCB-207ENST00000466072 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
PCCB-207ENST00000466072 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
PCCB-207ENST00000466072 ADAMTS12P58397 1594 aa30■■■□□ 2.39
PCCB-207ENST00000466072 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
PCCB-207ENST00000466072 IGF1RP08069 1367 aa29.96■■■□□ 2.39
PCCB-207ENST00000466072 FHAD1B1AJZ9 1412 aa29.95■■■□□ 2.39
PCCB-207ENST00000466072 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
PCCB-207ENST00000466072 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
PCCB-207ENST00000466072 CLASP1Q7Z460 1538 aa29.88■■■□□ 2.37
PCCB-207ENST00000466072 RIMBP3CA6NJZ7 1639 aa29.84■■■□□ 2.37
PCCB-207ENST00000466072 RIMBP3BA6NNM3 1639 aa29.84■■■□□ 2.37
PCCB-207ENST00000466072 RIMBP3Q9UFD9 1639 aa29.84■■■□□ 2.37
PCCB-207ENST00000466072 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
PCCB-207ENST00000466072 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
PCCB-207ENST00000466072 NUP160Q12769 1436 aa29.79■■■□□ 2.36
PCCB-207ENST00000466072 CARMIL1Q5VZK9 1371 aa29.75■■■□□ 2.35
PCCB-207ENST00000466072 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
PCCB-207ENST00000466072 CUL7Q14999 1698 aa29.71■■■□□ 2.35
PCCB-207ENST00000466072 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
PCCB-207ENST00000466072 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
PCCB-207ENST00000466072 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms