RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
PIKFYVE-204ENST00000407449 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
PIKFYVE-204ENST00000407449 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
PIKFYVE-204ENST00000407449 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
PIKFYVE-204ENST00000407449 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
PIKFYVE-204ENST00000407449 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
PIKFYVE-204ENST00000407449 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
PIKFYVE-204ENST00000407449 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
PIKFYVE-204ENST00000407449 ABCC9O60706 1549 aa29.09■■■□□ 2.25
PIKFYVE-204ENST00000407449 NACADO15069 1562 aa29.03■■■□□ 2.24
PIKFYVE-204ENST00000407449 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
PIKFYVE-204ENST00000407449 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
PIKFYVE-204ENST00000407449 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
PIKFYVE-204ENST00000407449 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
PIKFYVE-204ENST00000407449 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
PIKFYVE-204ENST00000407449 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
PIKFYVE-204ENST00000407449 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
PIKFYVE-204ENST00000407449 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.06
PIKFYVE-204ENST00000407449 WIZO95785 1651 aa27.87■■■□□ 2.05
PIKFYVE-204ENST00000407449 BICRAQ9NZM4 1560 aa27.8■■■□□ 2.04
PIKFYVE-204ENST00000407449 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
PIKFYVE-204ENST00000407449 TOP2AP11388 1531 aaKnown RBP27.58■■■□□ 2.01
PIKFYVE-204ENST00000407449 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
PIKFYVE-204ENST00000407449 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
PIKFYVE-204ENST00000407449 PEG3Q9GZU2 1588 aa27.38■■□□□ 1.97
PIKFYVE-204ENST00000407449 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
PIKFYVE-204ENST00000407449 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
PIKFYVE-204ENST00000407449 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
PIKFYVE-204ENST00000407449 LOC105371045A0A1W2PR82 267 aa27.14■■□□□ 1.94
PIKFYVE-204ENST00000407449 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
PIKFYVE-204ENST00000407449 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
PIKFYVE-204ENST00000407449 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
PIKFYVE-204ENST00000407449 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
PIKFYVE-204ENST00000407449 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
PIKFYVE-204ENST00000407449 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
PIKFYVE-204ENST00000407449 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
PIKFYVE-204ENST00000407449 EEA1Q15075 1411 aa26.59■■□□□ 1.85
PIKFYVE-204ENST00000407449 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
PIKFYVE-204ENST00000407449 PCGF6Q9BYE7 350 aa26.54■■□□□ 1.84
PIKFYVE-204ENST00000407449 SOGA1O94964 1423 aa26.53■■□□□ 1.84
PIKFYVE-204ENST00000407449 EHMT2Q96KQ7 1210 aa26.48■■□□□ 1.83
PIKFYVE-204ENST00000407449 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
PIKFYVE-204ENST00000407449 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
PIKFYVE-204ENST00000407449 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
PIKFYVE-204ENST00000407449 BIVM-ERCC5R4GMW8 1640 aa26.38■■□□□ 1.81
PIKFYVE-204ENST00000407449 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
PIKFYVE-204ENST00000407449 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
PIKFYVE-204ENST00000407449 CFTRP13569 1480 aa26.35■■□□□ 1.81
PIKFYVE-204ENST00000407449 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
PIKFYVE-204ENST00000407449 HRCP23327 699 aa26.29■■□□□ 1.8
PIKFYVE-204ENST00000407449 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
PIKFYVE-204ENST00000407449 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
PIKFYVE-204ENST00000407449 KIF21BO75037 1637 aa26.26■■□□□ 1.79
PIKFYVE-204ENST00000407449 CEP162Q5TB80 1403 aa26.21■■□□□ 1.79
PIKFYVE-204ENST00000407449 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
PIKFYVE-204ENST00000407449 CUX1P39880 1505 aa26.18■■□□□ 1.78
PIKFYVE-204ENST00000407449 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PIKFYVE-204ENST00000407449 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
PIKFYVE-204ENST00000407449 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
PIKFYVE-204ENST00000407449 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
PIKFYVE-204ENST00000407449 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
PIKFYVE-204ENST00000407449 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
PIKFYVE-204ENST00000407449 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
PIKFYVE-204ENST00000407449 CLIP1P30622 1438 aa25.86■■□□□ 1.73
PIKFYVE-204ENST00000407449 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.72
PIKFYVE-204ENST00000407449 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
PIKFYVE-204ENST00000407449 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
PIKFYVE-204ENST00000407449 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
PIKFYVE-204ENST00000407449 CUX2O14529 1486 aa25.74■■□□□ 1.71
PIKFYVE-204ENST00000407449 NESP48681 1621 aa25.74■■□□□ 1.71
PIKFYVE-204ENST00000407449 VPS8Q8N3P4 1428 aa25.73■■□□□ 1.71
PIKFYVE-204ENST00000407449 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
PIKFYVE-204ENST00000407449 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
PIKFYVE-204ENST00000407449 IGF1RP08069 1367 aa25.61■■□□□ 1.69
PIKFYVE-204ENST00000407449 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
PIKFYVE-204ENST00000407449 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
PIKFYVE-204ENST00000407449 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
PIKFYVE-204ENST00000407449 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PIKFYVE-204ENST00000407449 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
PIKFYVE-204ENST00000407449 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
PIKFYVE-204ENST00000407449 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
PIKFYVE-204ENST00000407449 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
PIKFYVE-204ENST00000407449 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
PIKFYVE-204ENST00000407449 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
PIKFYVE-204ENST00000407449 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
PIKFYVE-204ENST00000407449 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.67
PIKFYVE-204ENST00000407449 APLP2Q06481 763 aa25.44■■□□□ 1.66
PIKFYVE-204ENST00000407449 CUL7Q14999 1698 aa25.44■■□□□ 1.66
PIKFYVE-204ENST00000407449 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
PIKFYVE-204ENST00000407449 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
PIKFYVE-204ENST00000407449 CTTNBP2Q8WZ74 1663 aa25.27■■□□□ 1.64
PIKFYVE-204ENST00000407449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
PIKFYVE-204ENST00000407449 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
PIKFYVE-204ENST00000407449 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
PIKFYVE-204ENST00000407449 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
PIKFYVE-204ENST00000407449 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
PIKFYVE-204ENST00000407449 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
PIKFYVE-204ENST00000407449 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
PIKFYVE-204ENST00000407449 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
PIKFYVE-204ENST00000407449 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms