RNA–Protein interactions for RNA: ENST00000436477.6

AC011840.1-202, humanhuman

TSL 2 BASIC

Gene AC011840.1, Length 1,351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.1-202ENST00000436477 NISCHQ9Y2I1 1504 aa42.42■■■■■ 4.38
AC011840.1-202ENST00000436477 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
AC011840.1-202ENST00000436477 ABCC9O60706 1549 aa36.5■■■■□ 3.43
AC011840.1-202ENST00000436477 DCAF8L2P0C7V8 631 aa35.42■■■■□ 3.26
AC011840.1-202ENST00000436477 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
AC011840.1-202ENST00000436477 NACADO15069 1562 aa35.21■■■■□ 3.23
AC011840.1-202ENST00000436477 RB1CC1Q8TDY2 1594 aa35.2■■■■□ 3.23
AC011840.1-202ENST00000436477 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
AC011840.1-202ENST00000436477 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.2
AC011840.1-202ENST00000436477 UNC13AQ9UPW8 1703 aa34.6■■■■□ 3.13
AC011840.1-202ENST00000436477 SCRIBQ14160 1630 aa34.43■■■■□ 3.1
AC011840.1-202ENST00000436477 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
AC011840.1-202ENST00000436477 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
AC011840.1-202ENST00000436477 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
AC011840.1-202ENST00000436477 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
AC011840.1-202ENST00000436477 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
AC011840.1-202ENST00000436477 CECR2Q9BXF3 1484 aa33.07■■■□□ 2.88
AC011840.1-202ENST00000436477 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
AC011840.1-202ENST00000436477 SMARCA4P51532 1647 aa32.9■■■□□ 2.86
AC011840.1-202ENST00000436477 BAZ1AQ9NRL2 1556 aaPredicted RBP32.86■■■□□ 2.85
AC011840.1-202ENST00000436477 MROH2BQ7Z745 1585 aa32.76■■■□□ 2.83
AC011840.1-202ENST00000436477 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
AC011840.1-202ENST00000436477 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
AC011840.1-202ENST00000436477 WIZO95785 1651 aa32.5■■■□□ 2.79
AC011840.1-202ENST00000436477 PEG3Q9GZU2 1588 aa32.48■■■□□ 2.79
AC011840.1-202ENST00000436477 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.78
AC011840.1-202ENST00000436477 NCAPD3P42695 1498 aa32.44■■■□□ 2.78
AC011840.1-202ENST00000436477 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
AC011840.1-202ENST00000436477 BAZ1BQ9UIG0 1483 aaKnown RBP32.34■■■□□ 2.77
AC011840.1-202ENST00000436477 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
AC011840.1-202ENST00000436477 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
AC011840.1-202ENST00000436477 NESP48681 1621 aa31.71■■■□□ 2.67
AC011840.1-202ENST00000436477 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.67
AC011840.1-202ENST00000436477 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
AC011840.1-202ENST00000436477 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
AC011840.1-202ENST00000436477 CFTRP13569 1480 aa31.43■■■□□ 2.62
AC011840.1-202ENST00000436477 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
AC011840.1-202ENST00000436477 KIF21AQ7Z4S6 1674 aa31.42■■■□□ 2.62
AC011840.1-202ENST00000436477 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
AC011840.1-202ENST00000436477 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.6
AC011840.1-202ENST00000436477 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
AC011840.1-202ENST00000436477 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
AC011840.1-202ENST00000436477 THOC2Q8NI27 1593 aaKnown RBP31.12■■■□□ 2.57
AC011840.1-202ENST00000436477 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
AC011840.1-202ENST00000436477 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
AC011840.1-202ENST00000436477 WDR62O43379 1518 aa30.91■■■□□ 2.54
AC011840.1-202ENST00000436477 CUX2O14529 1486 aa30.85■■■□□ 2.53
AC011840.1-202ENST00000436477 TOPBP1Q92547 1522 aa30.79■■■□□ 2.52
AC011840.1-202ENST00000436477 DNMBPQ6XZF7 1577 aa30.78■■■□□ 2.52
AC011840.1-202ENST00000436477 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
AC011840.1-202ENST00000436477 CUX1P39880 1505 aa30.7■■■□□ 2.51
AC011840.1-202ENST00000436477 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
AC011840.1-202ENST00000436477 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
AC011840.1-202ENST00000436477 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
AC011840.1-202ENST00000436477 FGD5Q6ZNL6 1462 aa30.55■■■□□ 2.48
AC011840.1-202ENST00000436477 POLA1P09884 1462 aaPredicted RBP30.54■■■□□ 2.48
AC011840.1-202ENST00000436477 TOP2BQ02880 1626 aa30.53■■■□□ 2.48
AC011840.1-202ENST00000436477 IFT140Q96RY7 1462 aa30.45■■■□□ 2.47
AC011840.1-202ENST00000436477 RAD54L2Q9Y4B4 1467 aa30.45■■■□□ 2.47
AC011840.1-202ENST00000436477 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
AC011840.1-202ENST00000436477 SOGA1O94964 1423 aa30.41■■■□□ 2.46
AC011840.1-202ENST00000436477 ZNF608Q9ULD9 1512 aaPredicted RBP30.36■■■□□ 2.45
AC011840.1-202ENST00000436477 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
AC011840.1-202ENST00000436477 EIF4G3O43432 1585 aaKnown RBP30.29■■■□□ 2.44
AC011840.1-202ENST00000436477 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.43
AC011840.1-202ENST00000436477 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
AC011840.1-202ENST00000436477 ABCA10Q8WWZ4 1543 aa30.2■■■□□ 2.43
AC011840.1-202ENST00000436477 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
AC011840.1-202ENST00000436477 ABCA5Q8WWZ7 1642 aa30.12■■■□□ 2.41
AC011840.1-202ENST00000436477 PBRM1Q86U86 1689 aa30.12■■■□□ 2.41
AC011840.1-202ENST00000436477 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
AC011840.1-202ENST00000436477 CHIC1Q5VXU3 224 aa30.03■■■□□ 2.4
AC011840.1-202ENST00000436477 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
AC011840.1-202ENST00000436477 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.39
AC011840.1-202ENST00000436477 CHD1O14646 1710 aa29.93■■■□□ 2.38
AC011840.1-202ENST00000436477 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
AC011840.1-202ENST00000436477 RUSC2Q8N2Y8 1516 aa29.87■■■□□ 2.37
AC011840.1-202ENST00000436477 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
AC011840.1-202ENST00000436477 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
AC011840.1-202ENST00000436477 FBLN2P98095 1184 aa29.83■■■□□ 2.37
AC011840.1-202ENST00000436477 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
AC011840.1-202ENST00000436477 SYNJ2O15056 1496 aa29.75■■■□□ 2.35
AC011840.1-202ENST00000436477 CHMP7Q8WUX9 453 aaPredicted RBP29.74■■■□□ 2.35
AC011840.1-202ENST00000436477 IGF1RP08069 1367 aa29.73■■■□□ 2.35
AC011840.1-202ENST00000436477 CUL7Q14999 1698 aa29.71■■■□□ 2.35
AC011840.1-202ENST00000436477 FHAD1B1AJZ9 1412 aa29.7■■■□□ 2.35
AC011840.1-202ENST00000436477 OSCARQ8IYS5 282 aa29.66■■■□□ 2.34
AC011840.1-202ENST00000436477 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
AC011840.1-202ENST00000436477 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
AC011840.1-202ENST00000436477 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
AC011840.1-202ENST00000436477 EEA1Q15075 1411 aa29.53■■■□□ 2.32
AC011840.1-202ENST00000436477 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
AC011840.1-202ENST00000436477 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
AC011840.1-202ENST00000436477 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
AC011840.1-202ENST00000436477 CLASP1Q7Z460 1538 aa29.46■■■□□ 2.31
AC011840.1-202ENST00000436477 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
AC011840.1-202ENST00000436477 NUP160Q12769 1436 aa29.44■■■□□ 2.3
AC011840.1-202ENST00000436477 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
AC011840.1-202ENST00000436477 CTTNBP2Q8WZ74 1663 aa29.31■■■□□ 2.28
AC011840.1-202ENST00000436477 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms