RNA–Protein interactions for RNA: ENST00000357780.4

APOA4-201, Transcript of apolipoprotein A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA4, Length 1,473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4-201ENST00000357780 NISCHQ9Y2I1 1504 aa42.42■■■■■ 4.38
APOA4-201ENST00000357780 CCDC180Q9P1Z9 1646 aa37.53■■■■□ 3.6
APOA4-201ENST00000357780 ABCC9O60706 1549 aa36.53■■■■□ 3.44
APOA4-201ENST00000357780 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
APOA4-201ENST00000357780 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
APOA4-201ENST00000357780 NACADO15069 1562 aa35.27■■■■□ 3.24
APOA4-201ENST00000357780 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
APOA4-201ENST00000357780 MYO15BQ96JP2 1530 aa35.17■■■■□ 3.22
APOA4-201ENST00000357780 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
APOA4-201ENST00000357780 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
APOA4-201ENST00000357780 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
APOA4-201ENST00000357780 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
APOA4-201ENST00000357780 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
APOA4-201ENST00000357780 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
APOA4-201ENST00000357780 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
APOA4-201ENST00000357780 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
APOA4-201ENST00000357780 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
APOA4-201ENST00000357780 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
APOA4-201ENST00000357780 BAZ1AQ9NRL2 1556 aaPredicted RBP32.84■■■□□ 2.85
APOA4-201ENST00000357780 SMARCA4P51532 1647 aa32.82■■■□□ 2.84
APOA4-201ENST00000357780 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
APOA4-201ENST00000357780 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
APOA4-201ENST00000357780 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
APOA4-201ENST00000357780 SMARCA2P51531 1590 aa32.57■■■□□ 2.81
APOA4-201ENST00000357780 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
APOA4-201ENST00000357780 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
APOA4-201ENST00000357780 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
APOA4-201ENST00000357780 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
APOA4-201ENST00000357780 WIZO95785 1651 aa32.31■■■□□ 2.76
APOA4-201ENST00000357780 TOP2AP11388 1531 aaKnown RBP32.01■■■□□ 2.71
APOA4-201ENST00000357780 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.68
APOA4-201ENST00000357780 NESP48681 1621 aa31.68■■■□□ 2.66
APOA4-201ENST00000357780 CCDC88BA6NC98 1476 aa31.66■■■□□ 2.66
APOA4-201ENST00000357780 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
APOA4-201ENST00000357780 LAMC3Q9Y6N6 1575 aa31.63■■■□□ 2.65
APOA4-201ENST00000357780 CFTRP13569 1480 aa31.5■■■□□ 2.63
APOA4-201ENST00000357780 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
APOA4-201ENST00000357780 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.62
APOA4-201ENST00000357780 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.59
APOA4-201ENST00000357780 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
APOA4-201ENST00000357780 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
APOA4-201ENST00000357780 PRDM2Q13029 1718 aa31.18■■■□□ 2.58
APOA4-201ENST00000357780 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
APOA4-201ENST00000357780 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
APOA4-201ENST00000357780 CUX2O14529 1486 aa31.03■■■□□ 2.56
APOA4-201ENST00000357780 WDR62O43379 1518 aa30.97■■■□□ 2.55
APOA4-201ENST00000357780 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
APOA4-201ENST00000357780 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
APOA4-201ENST00000357780 TOPBP1Q92547 1522 aa30.78■■■□□ 2.52
APOA4-201ENST00000357780 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
APOA4-201ENST00000357780 CUX1P39880 1505 aa30.64■■■□□ 2.5
APOA4-201ENST00000357780 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
APOA4-201ENST00000357780 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
APOA4-201ENST00000357780 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
APOA4-201ENST00000357780 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
APOA4-201ENST00000357780 SOGA1O94964 1423 aa30.44■■■□□ 2.46
APOA4-201ENST00000357780 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
APOA4-201ENST00000357780 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
APOA4-201ENST00000357780 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
APOA4-201ENST00000357780 RAD54L2Q9Y4B4 1467 aa30.41■■■□□ 2.46
APOA4-201ENST00000357780 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
APOA4-201ENST00000357780 ZNF608Q9ULD9 1512 aaPredicted RBP30.36■■■□□ 2.45
APOA4-201ENST00000357780 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
APOA4-201ENST00000357780 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.43
APOA4-201ENST00000357780 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
APOA4-201ENST00000357780 EIF4G3O43432 1585 aaKnown RBP30.22■■■□□ 2.43
APOA4-201ENST00000357780 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
APOA4-201ENST00000357780 GAPVD1Q14C86 1478 aa30.08■■■□□ 2.41
APOA4-201ENST00000357780 TRIM41Q8WV44 630 aa30.06■■■□□ 2.4
APOA4-201ENST00000357780 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
APOA4-201ENST00000357780 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
APOA4-201ENST00000357780 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.38
APOA4-201ENST00000357780 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
APOA4-201ENST00000357780 PBRM1Q86U86 1689 aa29.93■■■□□ 2.38
APOA4-201ENST00000357780 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
APOA4-201ENST00000357780 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
APOA4-201ENST00000357780 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
APOA4-201ENST00000357780 FBLN2P98095 1184 aa29.85■■■□□ 2.37
APOA4-201ENST00000357780 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
APOA4-201ENST00000357780 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
APOA4-201ENST00000357780 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
APOA4-201ENST00000357780 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
APOA4-201ENST00000357780 IGF1RP08069 1367 aa29.78■■■□□ 2.36
APOA4-201ENST00000357780 CHD1O14646 1710 aa29.76■■■□□ 2.35
APOA4-201ENST00000357780 FHAD1B1AJZ9 1412 aa29.75■■■□□ 2.35
APOA4-201ENST00000357780 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
APOA4-201ENST00000357780 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
APOA4-201ENST00000357780 GRIN2AQ12879 1464 aa29.65■■■□□ 2.34
APOA4-201ENST00000357780 CUL7Q14999 1698 aa29.61■■■□□ 2.33
APOA4-201ENST00000357780 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
APOA4-201ENST00000357780 NUP160Q12769 1436 aa29.51■■■□□ 2.32
APOA4-201ENST00000357780 EEA1Q15075 1411 aa29.51■■■□□ 2.31
APOA4-201ENST00000357780 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
APOA4-201ENST00000357780 CSRNP3Q8WYN3 585 aa29.47■■■□□ 2.31
APOA4-201ENST00000357780 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
APOA4-201ENST00000357780 RAPGEF2Q9Y4G8 1499 aa29.43■■■□□ 2.3
APOA4-201ENST00000357780 PRXQ9BXM0 1461 aa29.41■■■□□ 2.3
APOA4-201ENST00000357780 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
APOA4-201ENST00000357780 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
APOA4-201ENST00000357780 KIAA0586Q9BVV6 1533 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms