RNA–Protein interactions for RNA: ENST00000555147.1

MC1R-202, Transcript of melanocortin 1 receptor, humanhuman

APPRIS P1 BASIC

Gene MC1R, Length 3,099 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MC1R-202ENST00000555147 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
MC1R-202ENST00000555147 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
MC1R-202ENST00000555147 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
MC1R-202ENST00000555147 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
MC1R-202ENST00000555147 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
MC1R-202ENST00000555147 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
MC1R-202ENST00000555147 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
MC1R-202ENST00000555147 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
MC1R-202ENST00000555147 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
MC1R-202ENST00000555147 ABCC9O60706 1549 aa26.33■■□□□ 1.8
MC1R-202ENST00000555147 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
MC1R-202ENST00000555147 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
MC1R-202ENST00000555147 HRCP23327 699 aa26.03■■□□□ 1.76
MC1R-202ENST00000555147 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
MC1R-202ENST00000555147 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
MC1R-202ENST00000555147 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
MC1R-202ENST00000555147 NACADO15069 1562 aa25.71■■□□□ 1.71
MC1R-202ENST00000555147 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
MC1R-202ENST00000555147 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
MC1R-202ENST00000555147 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
MC1R-202ENST00000555147 WIZO95785 1651 aa25.51■■□□□ 1.67
MC1R-202ENST00000555147 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
MC1R-202ENST00000555147 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
MC1R-202ENST00000555147 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
MC1R-202ENST00000555147 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
MC1R-202ENST00000555147 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
MC1R-202ENST00000555147 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
MC1R-202ENST00000555147 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.61
MC1R-202ENST00000555147 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
MC1R-202ENST00000555147 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
MC1R-202ENST00000555147 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
MC1R-202ENST00000555147 SMARCA2P51531 1590 aa24.95■■□□□ 1.59
MC1R-202ENST00000555147 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
MC1R-202ENST00000555147 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
MC1R-202ENST00000555147 PELP1Q8IZL8 1130 aaKnown RBP24.75■■□□□ 1.55
MC1R-202ENST00000555147 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.55
MC1R-202ENST00000555147 SOGA1O94964 1423 aa24.68■■□□□ 1.54
MC1R-202ENST00000555147 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
MC1R-202ENST00000555147 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
MC1R-202ENST00000555147 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
MC1R-202ENST00000555147 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
MC1R-202ENST00000555147 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
MC1R-202ENST00000555147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
MC1R-202ENST00000555147 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
MC1R-202ENST00000555147 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
MC1R-202ENST00000555147 EEA1Q15075 1411 aa24.38■■□□□ 1.49
MC1R-202ENST00000555147 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
MC1R-202ENST00000555147 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
MC1R-202ENST00000555147 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
MC1R-202ENST00000555147 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
MC1R-202ENST00000555147 CCER1Q8TC90 406 aaPredicted RBP24.24■■□□□ 1.47
MC1R-202ENST00000555147 KIF21BO75037 1637 aa24.21■■□□□ 1.47
MC1R-202ENST00000555147 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
MC1R-202ENST00000555147 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
MC1R-202ENST00000555147 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.45
MC1R-202ENST00000555147 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
MC1R-202ENST00000555147 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
MC1R-202ENST00000555147 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
MC1R-202ENST00000555147 CLIP1P30622 1438 aa24.01■■□□□ 1.43
MC1R-202ENST00000555147 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
MC1R-202ENST00000555147 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
MC1R-202ENST00000555147 MYT1Q01538 1121 aa23.93■■□□□ 1.42
MC1R-202ENST00000555147 DIEXFQ68CQ4 756 aaKnown RBP23.85■■□□□ 1.41
MC1R-202ENST00000555147 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
MC1R-202ENST00000555147 CUX1P39880 1505 aa23.83■■□□□ 1.41
MC1R-202ENST00000555147 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
MC1R-202ENST00000555147 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
MC1R-202ENST00000555147 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
MC1R-202ENST00000555147 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
MC1R-202ENST00000555147 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
MC1R-202ENST00000555147 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
MC1R-202ENST00000555147 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
MC1R-202ENST00000555147 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
MC1R-202ENST00000555147 CFTRP13569 1480 aa23.67■■□□□ 1.38
MC1R-202ENST00000555147 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
MC1R-202ENST00000555147 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
MC1R-202ENST00000555147 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
MC1R-202ENST00000555147 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
MC1R-202ENST00000555147 APLP2Q06481 763 aa23.53■■□□□ 1.36
MC1R-202ENST00000555147 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.35
MC1R-202ENST00000555147 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
MC1R-202ENST00000555147 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
MC1R-202ENST00000555147 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
MC1R-202ENST00000555147 MIER1Q8N108 512 aa23.43■■□□□ 1.34
MC1R-202ENST00000555147 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.33
MC1R-202ENST00000555147 IGF1RP08069 1367 aa23.38■■□□□ 1.33
MC1R-202ENST00000555147 CUX2O14529 1486 aa23.38■■□□□ 1.33
MC1R-202ENST00000555147 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
MC1R-202ENST00000555147 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
MC1R-202ENST00000555147 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
MC1R-202ENST00000555147 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
MC1R-202ENST00000555147 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
MC1R-202ENST00000555147 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
MC1R-202ENST00000555147 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
MC1R-202ENST00000555147 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
MC1R-202ENST00000555147 MAP3K1Q13233 1512 aa23.17■■□□□ 1.3
MC1R-202ENST00000555147 MAPKBP1O60336 1514 aa23.16■■□□□ 1.3
MC1R-202ENST00000555147 PCF11O94913 1555 aaKnown RBP23.15■■□□□ 1.3
MC1R-202ENST00000555147 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
MC1R-202ENST00000555147 CFAP43Q8NDM7 1665 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms