RNA–Protein interactions for RNA: ENST00000338916.8

SYT3-201, Transcript of synaptotagmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYT3, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT3-201ENST00000338916 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
SYT3-201ENST00000338916 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
SYT3-201ENST00000338916 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
SYT3-201ENST00000338916 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
SYT3-201ENST00000338916 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
SYT3-201ENST00000338916 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
SYT3-201ENST00000338916 ABCC9O60706 1549 aa27.95■■■□□ 2.06
SYT3-201ENST00000338916 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
SYT3-201ENST00000338916 NACADO15069 1562 aa27.58■■■□□ 2.01
SYT3-201ENST00000338916 SUPT5HO00267 1087 aaKnown RBP27.55■■■□□ 2
SYT3-201ENST00000338916 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
SYT3-201ENST00000338916 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
SYT3-201ENST00000338916 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
SYT3-201ENST00000338916 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
SYT3-201ENST00000338916 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
SYT3-201ENST00000338916 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
SYT3-201ENST00000338916 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
SYT3-201ENST00000338916 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
SYT3-201ENST00000338916 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SYT3-201ENST00000338916 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
SYT3-201ENST00000338916 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
SYT3-201ENST00000338916 WIZO95785 1651 aa26.18■■□□□ 1.78
SYT3-201ENST00000338916 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
SYT3-201ENST00000338916 PCGF6Q9BYE7 350 aa25.97■■□□□ 1.75
SYT3-201ENST00000338916 HRCP23327 699 aa25.95■■□□□ 1.74
SYT3-201ENST00000338916 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
SYT3-201ENST00000338916 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
SYT3-201ENST00000338916 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
SYT3-201ENST00000338916 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
SYT3-201ENST00000338916 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
SYT3-201ENST00000338916 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
SYT3-201ENST00000338916 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
SYT3-201ENST00000338916 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
SYT3-201ENST00000338916 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
SYT3-201ENST00000338916 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
SYT3-201ENST00000338916 PPARGC1BQ86YN6 1023 aaKnown RBP25.45■■□□□ 1.67
SYT3-201ENST00000338916 TRIM26Q12899 539 aaPredicted RBP25.45■■□□□ 1.66
SYT3-201ENST00000338916 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
SYT3-201ENST00000338916 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
SYT3-201ENST00000338916 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
SYT3-201ENST00000338916 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
SYT3-201ENST00000338916 CFTRP13569 1480 aa24.95■■□□□ 1.58
SYT3-201ENST00000338916 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
SYT3-201ENST00000338916 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
SYT3-201ENST00000338916 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
SYT3-201ENST00000338916 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
SYT3-201ENST00000338916 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
SYT3-201ENST00000338916 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
SYT3-201ENST00000338916 BIVM-ERCC5R4GMW8 1640 aa24.71■■□□□ 1.55
SYT3-201ENST00000338916 SOGA1O94964 1423 aa24.69■■□□□ 1.54
SYT3-201ENST00000338916 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
SYT3-201ENST00000338916 CUX1P39880 1505 aa24.64■■□□□ 1.54
SYT3-201ENST00000338916 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
SYT3-201ENST00000338916 EEA1Q15075 1411 aa24.61■■□□□ 1.53
SYT3-201ENST00000338916 NESP48681 1621 aa24.6■■□□□ 1.53
SYT3-201ENST00000338916 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.53
SYT3-201ENST00000338916 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
SYT3-201ENST00000338916 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
SYT3-201ENST00000338916 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
SYT3-201ENST00000338916 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
SYT3-201ENST00000338916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
SYT3-201ENST00000338916 TTBK1Q5TCY1 1321 aaPredicted RBP24.45■■□□□ 1.51
SYT3-201ENST00000338916 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
SYT3-201ENST00000338916 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
SYT3-201ENST00000338916 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
SYT3-201ENST00000338916 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SYT3-201ENST00000338916 DNMBPQ6XZF7 1577 aa24.36■■□□□ 1.49
SYT3-201ENST00000338916 GOLGA3Q08378 1498 aa24.35■■□□□ 1.49
SYT3-201ENST00000338916 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
SYT3-201ENST00000338916 KIF21BO75037 1637 aa24.32■■□□□ 1.48
SYT3-201ENST00000338916 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
SYT3-201ENST00000338916 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
SYT3-201ENST00000338916 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
SYT3-201ENST00000338916 URB2Q14146 1524 aaKnown RBP24.26■■□□□ 1.47
SYT3-201ENST00000338916 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
SYT3-201ENST00000338916 CUX2O14529 1486 aa24.19■■□□□ 1.46
SYT3-201ENST00000338916 RAPGEF2Q9Y4G8 1499 aa24.17■■□□□ 1.46
SYT3-201ENST00000338916 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
SYT3-201ENST00000338916 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
SYT3-201ENST00000338916 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
SYT3-201ENST00000338916 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
SYT3-201ENST00000338916 CLIP1P30622 1438 aa24.09■■□□□ 1.45
SYT3-201ENST00000338916 IGF1RP08069 1367 aa24.07■■□□□ 1.44
SYT3-201ENST00000338916 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
SYT3-201ENST00000338916 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
SYT3-201ENST00000338916 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
SYT3-201ENST00000338916 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
SYT3-201ENST00000338916 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
SYT3-201ENST00000338916 WDR62O43379 1518 aa23.95■■□□□ 1.42
SYT3-201ENST00000338916 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
SYT3-201ENST00000338916 CARMIL1Q5VZK9 1371 aa23.93■■□□□ 1.42
SYT3-201ENST00000338916 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
SYT3-201ENST00000338916 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
SYT3-201ENST00000338916 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
SYT3-201ENST00000338916 DIEXFQ68CQ4 756 aaKnown RBP23.9■■□□□ 1.42
SYT3-201ENST00000338916 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
SYT3-201ENST00000338916 APLP2Q06481 763 aa23.87■■□□□ 1.41
SYT3-201ENST00000338916 CUL7Q14999 1698 aa23.87■■□□□ 1.41
SYT3-201ENST00000338916 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
SYT3-201ENST00000338916 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms