Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PEPDP12955 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PEPDP12955 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
PEPDP12955 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
PEPDP12955 TSPY26P-202ENST00000565928 3884 ntBASIC15.29■□□□□ 0.04
PEPDP12955 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEPDP12955 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PEPDP12955 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
PEPDP12955 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.28■□□□□ 0.04
PEPDP12955 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 AL513480.1-201ENST00000451731 511 ntBASIC15.28■□□□□ 0.04
PEPDP12955 HLA-J-202ENST00000469281 1241 ntBASIC15.28■□□□□ 0.04
PEPDP12955 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.28■□□□□ 0.04
PEPDP12955 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.28■□□□□ 0.04
PEPDP12955 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.28■□□□□ 0.04
PEPDP12955 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.28■□□□□ 0.04
PEPDP12955 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.28■□□□□ 0.04
PEPDP12955 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PEPDP12955 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PEPDP12955 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 KRT8P49-201ENST00000604166 1432 ntBASIC15.27■□□□□ 0.04
PEPDP12955 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 TOP3BP1-201ENST00000420768 1380 ntBASIC15.27■□□□□ 0.04
PEPDP12955 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PEPDP12955 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.27■□□□□ 0.04
PEPDP12955 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.27■□□□□ 0.04
PEPDP12955 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 YBX2P1-201ENST00000394192 760 ntBASIC15.27■□□□□ 0.04
PEPDP12955 MCCD1P2-201ENST00000423228 335 ntBASIC15.27■□□□□ 0.04
PEPDP12955 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.27■□□□□ 0.04
PEPDP12955 MIR3687-2-201ENST00000577708 61 ntBASIC15.27■□□□□ 0.04
PEPDP12955 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PEPDP12955 MIR3687-1-201ENST00000614492 61 ntBASIC15.27■□□□□ 0.04
PEPDP12955 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.27■□□□□ 0.04
PEPDP12955 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.27■□□□□ 0.04
PEPDP12955 REXO1L3P-201ENST00000622202 1288 ntBASIC15.27■□□□□ 0.04
PEPDP12955 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PEPDP12955 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
PEPDP12955 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PEPDP12955 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms