RNA–Protein interactions for RNA: ENST00000419343.7

PDCD5-203, Transcript of programmed cell death 5, humanhuman

TSL 2 BASIC

Gene PDCD5, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-203ENST00000419343 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
PDCD5-203ENST00000419343 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
PDCD5-203ENST00000419343 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
PDCD5-203ENST00000419343 ABCC9O60706 1549 aa32.42■■■□□ 2.78
PDCD5-203ENST00000419343 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
PDCD5-203ENST00000419343 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
PDCD5-203ENST00000419343 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
PDCD5-203ENST00000419343 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
PDCD5-203ENST00000419343 NACADO15069 1562 aa31.57■■■□□ 2.65
PDCD5-203ENST00000419343 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
PDCD5-203ENST00000419343 SCRIBQ14160 1630 aa31.21■■■□□ 2.59
PDCD5-203ENST00000419343 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
PDCD5-203ENST00000419343 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
PDCD5-203ENST00000419343 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
PDCD5-203ENST00000419343 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
PDCD5-203ENST00000419343 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
PDCD5-203ENST00000419343 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.4
PDCD5-203ENST00000419343 MROH2BQ7Z745 1585 aa29.99■■■□□ 2.39
PDCD5-203ENST00000419343 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
PDCD5-203ENST00000419343 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
PDCD5-203ENST00000419343 WIZO95785 1651 aa29.71■■■□□ 2.35
PDCD5-203ENST00000419343 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
PDCD5-203ENST00000419343 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
PDCD5-203ENST00000419343 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
PDCD5-203ENST00000419343 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
PDCD5-203ENST00000419343 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
PDCD5-203ENST00000419343 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
PDCD5-203ENST00000419343 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
PDCD5-203ENST00000419343 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
PDCD5-203ENST00000419343 CCDC88BA6NC98 1476 aa29.11■■■□□ 2.25
PDCD5-203ENST00000419343 HMGXB3Q12766 1538 aa29.08■■■□□ 2.25
PDCD5-203ENST00000419343 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
PDCD5-203ENST00000419343 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
PDCD5-203ENST00000419343 CFTRP13569 1480 aa28.49■■■□□ 2.15
PDCD5-203ENST00000419343 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
PDCD5-203ENST00000419343 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
PDCD5-203ENST00000419343 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
PDCD5-203ENST00000419343 NESP48681 1621 aa28.39■■■□□ 2.14
PDCD5-203ENST00000419343 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
PDCD5-203ENST00000419343 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.1
PDCD5-203ENST00000419343 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
PDCD5-203ENST00000419343 FANCD2Q9BXW9 1451 aa28.16■■■□□ 2.1
PDCD5-203ENST00000419343 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
PDCD5-203ENST00000419343 CUX1P39880 1505 aa28.05■■■□□ 2.08
PDCD5-203ENST00000419343 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
PDCD5-203ENST00000419343 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
PDCD5-203ENST00000419343 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
PDCD5-203ENST00000419343 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
PDCD5-203ENST00000419343 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
PDCD5-203ENST00000419343 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
PDCD5-203ENST00000419343 SOGA1O94964 1423 aa27.89■■■□□ 2.05
PDCD5-203ENST00000419343 URB2Q14146 1524 aaKnown RBP27.84■■■□□ 2.05
PDCD5-203ENST00000419343 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
PDCD5-203ENST00000419343 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
PDCD5-203ENST00000419343 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
PDCD5-203ENST00000419343 LOC105371045A0A1W2PR82 267 aa27.79■■■□□ 2.04
PDCD5-203ENST00000419343 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
PDCD5-203ENST00000419343 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
PDCD5-203ENST00000419343 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
PDCD5-203ENST00000419343 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
PDCD5-203ENST00000419343 POLA1P09884 1462 aaPredicted RBP27.67■■■□□ 2.02
PDCD5-203ENST00000419343 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
PDCD5-203ENST00000419343 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
PDCD5-203ENST00000419343 EEA1Q15075 1411 aa27.6■■■□□ 2.01
PDCD5-203ENST00000419343 CUX2O14529 1486 aa27.57■■■□□ 2
PDCD5-203ENST00000419343 WDR62O43379 1518 aa27.54■■■□□ 2
PDCD5-203ENST00000419343 KIF27Q86VH2 1401 aa27.53■■■□□ 2
PDCD5-203ENST00000419343 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
PDCD5-203ENST00000419343 ABCA10Q8WWZ4 1543 aa27.47■■□□□ 1.99
PDCD5-203ENST00000419343 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
PDCD5-203ENST00000419343 TARBP1Q13395 1621 aaKnown RBP27.39■■□□□ 1.98
PDCD5-203ENST00000419343 IGF1RP08069 1367 aa27.37■■□□□ 1.97
PDCD5-203ENST00000419343 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
PDCD5-203ENST00000419343 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
PDCD5-203ENST00000419343 RAPGEF2Q9Y4G8 1499 aa27.3■■□□□ 1.96
PDCD5-203ENST00000419343 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
PDCD5-203ENST00000419343 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
PDCD5-203ENST00000419343 PRXQ9BXM0 1461 aa27.28■■□□□ 1.96
PDCD5-203ENST00000419343 KIF21BO75037 1637 aa27.28■■□□□ 1.96
PDCD5-203ENST00000419343 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
PDCD5-203ENST00000419343 AQRO60306 1485 aaKnown RBP eCLIP27.28■■□□□ 1.962e-9■■■■■ 26.8
PDCD5-203ENST00000419343 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
PDCD5-203ENST00000419343 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
PDCD5-203ENST00000419343 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
PDCD5-203ENST00000419343 TNIKQ9UKE5 1360 aa27.16■■□□□ 1.94
PDCD5-203ENST00000419343 ERICH3Q5RHP9 1530 aa27.13■■□□□ 1.93
PDCD5-203ENST00000419343 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
PDCD5-203ENST00000419343 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
PDCD5-203ENST00000419343 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
PDCD5-203ENST00000419343 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
PDCD5-203ENST00000419343 CUL7Q14999 1698 aa27.04■■□□□ 1.92
PDCD5-203ENST00000419343 CEP162Q5TB80 1403 aa27.03■■□□□ 1.92
PDCD5-203ENST00000419343 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
PDCD5-203ENST00000419343 FHAD1B1AJZ9 1412 aa26.95■■□□□ 1.9
PDCD5-203ENST00000419343 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
PDCD5-203ENST00000419343 CLIP1P30622 1438 aa26.88■■□□□ 1.89
PDCD5-203ENST00000419343 FBLN2P98095 1184 aa26.84■■□□□ 1.89
PDCD5-203ENST00000419343 MAGI1Q96QZ7 1491 aaPredicted RBP26.84■■□□□ 1.89
PDCD5-203ENST00000419343 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
PDCD5-203ENST00000419343 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 988.6 ms