RNA–Protein interactions for RNA: ENST00000313486.11

PITPNA-201, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PITPNA, Length 3,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-201ENST00000313486 NISCHQ9Y2I1 1504 aa34■■■■□ 3.03
PITPNA-201ENST00000313486 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
PITPNA-201ENST00000313486 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
PITPNA-201ENST00000313486 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
PITPNA-201ENST00000313486 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
PITPNA-201ENST00000313486 ABCC9O60706 1549 aa28.33■■■□□ 2.13
PITPNA-201ENST00000313486 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
PITPNA-201ENST00000313486 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
PITPNA-201ENST00000313486 MYO15BQ96JP2 1530 aa27.56■■■□□ 2
PITPNA-201ENST00000313486 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
PITPNA-201ENST00000313486 NACADO15069 1562 aa27.39■■□□□ 1.98
PITPNA-201ENST00000313486 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
PITPNA-201ENST00000313486 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
PITPNA-201ENST00000313486 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
PITPNA-201ENST00000313486 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
PITPNA-201ENST00000313486 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
PITPNA-201ENST00000313486 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
PITPNA-201ENST00000313486 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
PITPNA-201ENST00000313486 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.83
PITPNA-201ENST00000313486 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
PITPNA-201ENST00000313486 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
PITPNA-201ENST00000313486 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
PITPNA-201ENST00000313486 HRCP23327 699 aa26.4■■□□□ 1.82
PITPNA-201ENST00000313486 WIZO95785 1651 aa26.33■■□□□ 1.81
PITPNA-201ENST00000313486 EIF4G1Q04637 1599 aaKnown RBP26.3■■□□□ 1.8
PITPNA-201ENST00000313486 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
PITPNA-201ENST00000313486 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
PITPNA-201ENST00000313486 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
PITPNA-201ENST00000313486 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
PITPNA-201ENST00000313486 BICRAQ9NZM4 1560 aa26.02■■□□□ 1.76
PITPNA-201ENST00000313486 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
PITPNA-201ENST00000313486 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
PITPNA-201ENST00000313486 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
PITPNA-201ENST00000313486 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
PITPNA-201ENST00000313486 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
PITPNA-201ENST00000313486 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
PITPNA-201ENST00000313486 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PITPNA-201ENST00000313486 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
PITPNA-201ENST00000313486 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
PITPNA-201ENST00000313486 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
PITPNA-201ENST00000313486 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
PITPNA-201ENST00000313486 SOGA1O94964 1423 aa25.34■■□□□ 1.65
PITPNA-201ENST00000313486 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
PITPNA-201ENST00000313486 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
PITPNA-201ENST00000313486 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.644e-6■■■■□ 21.5
PITPNA-201ENST00000313486 SYNJ1O43426 1573 aa25.2■■□□□ 1.62
PITPNA-201ENST00000313486 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
PITPNA-201ENST00000313486 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
PITPNA-201ENST00000313486 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
PITPNA-201ENST00000313486 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
PITPNA-201ENST00000313486 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
PITPNA-201ENST00000313486 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
PITPNA-201ENST00000313486 EEA1Q15075 1411 aa25.08■■□□□ 1.61
PITPNA-201ENST00000313486 ZEB1P37275 1124 aaPredicted RBP25.05■■□□□ 1.6
PITPNA-201ENST00000313486 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
PITPNA-201ENST00000313486 KIF21BO75037 1637 aa25■■□□□ 1.59
PITPNA-201ENST00000313486 APLP2Q06481 763 aa24.98■■□□□ 1.59
PITPNA-201ENST00000313486 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
PITPNA-201ENST00000313486 GOLGA3Q08378 1498 aa24.9■■□□□ 1.58
PITPNA-201ENST00000313486 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
PITPNA-201ENST00000313486 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
PITPNA-201ENST00000313486 YTHDC1Q96MU7 727 aaKnown RBP24.86■■□□□ 1.57
PITPNA-201ENST00000313486 CFTRP13569 1480 aa24.84■■□□□ 1.57
PITPNA-201ENST00000313486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
PITPNA-201ENST00000313486 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
PITPNA-201ENST00000313486 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
PITPNA-201ENST00000313486 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
PITPNA-201ENST00000313486 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
PITPNA-201ENST00000313486 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
PITPNA-201ENST00000313486 ITGAEP38570 1179 aa24.67■■□□□ 1.54
PITPNA-201ENST00000313486 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
PITPNA-201ENST00000313486 NESP48681 1621 aa24.67■■□□□ 1.54
PITPNA-201ENST00000313486 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
PITPNA-201ENST00000313486 CUX1P39880 1505 aa24.62■■□□□ 1.53
PITPNA-201ENST00000313486 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
PITPNA-201ENST00000313486 CLIP1P30622 1438 aa24.6■■□□□ 1.53
PITPNA-201ENST00000313486 VPS8Q8N3P4 1428 aa24.57■■□□□ 1.52
PITPNA-201ENST00000313486 CUX2O14529 1486 aa24.56■■□□□ 1.52
PITPNA-201ENST00000313486 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
PITPNA-201ENST00000313486 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
PITPNA-201ENST00000313486 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
PITPNA-201ENST00000313486 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
PITPNA-201ENST00000313486 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
PITPNA-201ENST00000313486 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
PITPNA-201ENST00000313486 SCAF1Q9H7N4 1312 aaKnown RBP24.36■■□□□ 1.49
PITPNA-201ENST00000313486 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
PITPNA-201ENST00000313486 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
PITPNA-201ENST00000313486 FBLN2P98095 1184 aa24.33■■□□□ 1.49
PITPNA-201ENST00000313486 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
PITPNA-201ENST00000313486 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
PITPNA-201ENST00000313486 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
PITPNA-201ENST00000313486 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
PITPNA-201ENST00000313486 IGF1RP08069 1367 aa24.23■■□□□ 1.47
PITPNA-201ENST00000313486 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
PITPNA-201ENST00000313486 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
PITPNA-201ENST00000313486 ARHGAP35Q9NRY4 1499 aa24.2■■□□□ 1.47
PITPNA-201ENST00000313486 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.46
PITPNA-201ENST00000313486 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
PITPNA-201ENST00000313486 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
PITPNA-201ENST00000313486 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms