RNA–Protein interactions for RNA: ENST00000334047.11

F3-201, Transcript of coagulation factor III, tissue factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene F3, Length 2,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
F3-201ENST00000334047 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
F3-201ENST00000334047 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
F3-201ENST00000334047 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
F3-201ENST00000334047 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
F3-201ENST00000334047 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
F3-201ENST00000334047 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
F3-201ENST00000334047 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
F3-201ENST00000334047 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
F3-201ENST00000334047 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
F3-201ENST00000334047 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
F3-201ENST00000334047 ABCC9O60706 1549 aa27.89■■■□□ 2.06
F3-201ENST00000334047 NACADO15069 1562 aa27.71■■■□□ 2.03
F3-201ENST00000334047 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
F3-201ENST00000334047 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
F3-201ENST00000334047 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
F3-201ENST00000334047 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
F3-201ENST00000334047 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
F3-201ENST00000334047 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
F3-201ENST00000334047 WIZO95785 1651 aa27.04■■□□□ 1.92
F3-201ENST00000334047 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
F3-201ENST00000334047 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
F3-201ENST00000334047 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.88
F3-201ENST00000334047 HRCP23327 699 aa26.82■■□□□ 1.88
F3-201ENST00000334047 FAM9AQ8IZU1 332 aaPredicted RBP26.79■■□□□ 1.88
F3-201ENST00000334047 SMARCA4P51532 1647 aa26.73■■□□□ 1.87
F3-201ENST00000334047 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
F3-201ENST00000334047 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
F3-201ENST00000334047 EIF4G1Q04637 1599 aaKnown RBP26.6■■□□□ 1.85
F3-201ENST00000334047 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
F3-201ENST00000334047 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
F3-201ENST00000334047 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
F3-201ENST00000334047 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
F3-201ENST00000334047 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
F3-201ENST00000334047 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
F3-201ENST00000334047 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
F3-201ENST00000334047 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
F3-201ENST00000334047 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
F3-201ENST00000334047 SOGA1O94964 1423 aa26.09■■□□□ 1.77
F3-201ENST00000334047 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
F3-201ENST00000334047 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
F3-201ENST00000334047 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
F3-201ENST00000334047 EEA1Q15075 1411 aa25.94■■□□□ 1.74
F3-201ENST00000334047 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
F3-201ENST00000334047 CEP162Q5TB80 1403 aa25.87■■□□□ 1.73
F3-201ENST00000334047 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
F3-201ENST00000334047 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
F3-201ENST00000334047 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
F3-201ENST00000334047 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
F3-201ENST00000334047 GOLGA3Q08378 1498 aa25.75■■□□□ 1.71
F3-201ENST00000334047 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
F3-201ENST00000334047 NCAPD3P42695 1498 aa25.64■■□□□ 1.7
F3-201ENST00000334047 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
F3-201ENST00000334047 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
F3-201ENST00000334047 KIF21BO75037 1637 aa25.58■■□□□ 1.69
F3-201ENST00000334047 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
F3-201ENST00000334047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
F3-201ENST00000334047 RAPGEF2Q9Y4G8 1499 aa25.46■■□□□ 1.67
F3-201ENST00000334047 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
F3-201ENST00000334047 CCER1Q8TC90 406 aaPredicted RBP25.44■■□□□ 1.66
F3-201ENST00000334047 CLIP1P30622 1438 aa25.44■■□□□ 1.66
F3-201ENST00000334047 CFTRP13569 1480 aa25.38■■□□□ 1.65
F3-201ENST00000334047 CUX1P39880 1505 aa25.36■■□□□ 1.65
F3-201ENST00000334047 RANGAP1P46060 587 aaPredicted RBP25.32■■□□□ 1.64
F3-201ENST00000334047 VPS8Q8N3P4 1428 aa25.31■■□□□ 1.64
F3-201ENST00000334047 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
F3-201ENST00000334047 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
F3-201ENST00000334047 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
F3-201ENST00000334047 APLP2Q06481 763 aa25.18■■□□□ 1.62
F3-201ENST00000334047 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
F3-201ENST00000334047 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
F3-201ENST00000334047 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
F3-201ENST00000334047 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
F3-201ENST00000334047 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
F3-201ENST00000334047 CUX2O14529 1486 aa25■■□□□ 1.59
F3-201ENST00000334047 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
F3-201ENST00000334047 IGF1RP08069 1367 aa24.94■■□□□ 1.58
F3-201ENST00000334047 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
F3-201ENST00000334047 KANK4Q5T7N3 995 aaPredicted RBP24.88■■□□□ 1.57
F3-201ENST00000334047 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
F3-201ENST00000334047 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
F3-201ENST00000334047 DIEXFQ68CQ4 756 aaKnown RBP24.8■■□□□ 1.56
F3-201ENST00000334047 NESP48681 1621 aa24.77■■□□□ 1.56
F3-201ENST00000334047 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
F3-201ENST00000334047 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
F3-201ENST00000334047 TOPBP1Q92547 1522 aa24.7■■□□□ 1.55
F3-201ENST00000334047 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
F3-201ENST00000334047 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
F3-201ENST00000334047 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
F3-201ENST00000334047 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
F3-201ENST00000334047 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
F3-201ENST00000334047 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
F3-201ENST00000334047 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
F3-201ENST00000334047 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
F3-201ENST00000334047 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
F3-201ENST00000334047 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
F3-201ENST00000334047 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
F3-201ENST00000334047 MAP3K1Q13233 1512 aa24.53■■□□□ 1.52
F3-201ENST00000334047 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
F3-201ENST00000334047 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
F3-201ENST00000334047 ITGAEP38570 1179 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms