RNA–Protein interactions for RNA: ENST00000628663.1

PC-214, Transcript of pyruvate carboxylase, humanhuman

TSL 5 BASIC

Gene PC, Length 1,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-214ENST00000628663 NISCHQ9Y2I1 1504 aa41.36■■■■■ 4.21
PC-214ENST00000628663 CCDC180Q9P1Z9 1646 aa36.8■■■■□ 3.48
PC-214ENST00000628663 ABCC9O60706 1549 aa36.1■■■■□ 3.37
PC-214ENST00000628663 RB1CC1Q8TDY2 1594 aa34.67■■■■□ 3.14
PC-214ENST00000628663 NACADO15069 1562 aa34.61■■■■□ 3.13
PC-214ENST00000628663 DCAF8L2P0C7V8 631 aa34.56■■■■□ 3.12
PC-214ENST00000628663 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
PC-214ENST00000628663 MYO15BQ96JP2 1530 aa34.39■■■■□ 3.1
PC-214ENST00000628663 DCAF1Q9Y4B6 1507 aa34.21■■■■□ 3.07
PC-214ENST00000628663 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
PC-214ENST00000628663 PABPN1Q86U42 306 aaKnown RBP eCLIP33.71■■■□□ 2.99
PC-214ENST00000628663 BICRAQ9NZM4 1560 aa33.67■■■□□ 2.98
PC-214ENST00000628663 SCRIBQ14160 1630 aa33.58■■■□□ 2.97
PC-214ENST00000628663 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.91
PC-214ENST00000628663 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
PC-214ENST00000628663 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
PC-214ENST00000628663 CC2D2AQ9P2K1 1620 aa32.66■■■□□ 2.82
PC-214ENST00000628663 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
PC-214ENST00000628663 SMARCA4P51532 1647 aa32.11■■■□□ 2.73
PC-214ENST00000628663 BAZ1AQ9NRL2 1556 aaPredicted RBP32.06■■■□□ 2.72
PC-214ENST00000628663 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
PC-214ENST00000628663 NCAPD3P42695 1498 aa31.95■■■□□ 2.71
PC-214ENST00000628663 SMARCA2P51531 1590 aa31.9■■■□□ 2.7
PC-214ENST00000628663 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
PC-214ENST00000628663 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
PC-214ENST00000628663 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
PC-214ENST00000628663 BAZ1BQ9UIG0 1483 aaKnown RBP31.67■■■□□ 2.66
PC-214ENST00000628663 WIZO95785 1651 aa31.55■■■□□ 2.64
PC-214ENST00000628663 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
PC-214ENST00000628663 NESP48681 1621 aa31.23■■■□□ 2.59
PC-214ENST00000628663 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
PC-214ENST00000628663 LAMC3Q9Y6N6 1575 aa31.12■■■□□ 2.57
PC-214ENST00000628663 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
PC-214ENST00000628663 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
PC-214ENST00000628663 PDS5BQ9NTI5 1447 aa30.89■■■□□ 2.54
PC-214ENST00000628663 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
PC-214ENST00000628663 CCDC88BA6NC98 1476 aa30.82■■■□□ 2.52
PC-214ENST00000628663 CFTRP13569 1480 aa30.82■■■□□ 2.52
PC-214ENST00000628663 CUX2O14529 1486 aa30.8■■■□□ 2.52
PC-214ENST00000628663 THOC2Q8NI27 1593 aaKnown RBP30.78■■■□□ 2.52
PC-214ENST00000628663 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
PC-214ENST00000628663 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
PC-214ENST00000628663 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
PC-214ENST00000628663 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
PC-214ENST00000628663 PRDM2Q13029 1718 aa30.58■■■□□ 2.49
PC-214ENST00000628663 WDR62O43379 1518 aa30.51■■■□□ 2.48
PC-214ENST00000628663 URB2Q14146 1524 aaKnown RBP30.38■■■□□ 2.45
PC-214ENST00000628663 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
PC-214ENST00000628663 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
PC-214ENST00000628663 DNMBPQ6XZF7 1577 aa30.11■■■□□ 2.41
PC-214ENST00000628663 IFT140Q96RY7 1462 aa29.97■■■□□ 2.39
PC-214ENST00000628663 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
PC-214ENST00000628663 CUX1P39880 1505 aa29.92■■■□□ 2.38
PC-214ENST00000628663 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
PC-214ENST00000628663 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
PC-214ENST00000628663 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
PC-214ENST00000628663 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
PC-214ENST00000628663 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
PC-214ENST00000628663 SOGA1O94964 1423 aa29.76■■■□□ 2.35
PC-214ENST00000628663 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
PC-214ENST00000628663 AQRO60306 1485 aaKnown RBP eCLIP29.69■■■□□ 2.344e-6■■■□□ 17.4
PC-214ENST00000628663 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
PC-214ENST00000628663 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
PC-214ENST00000628663 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
PC-214ENST00000628663 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
PC-214ENST00000628663 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
PC-214ENST00000628663 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
PC-214ENST00000628663 ABCA10Q8WWZ4 1543 aa29.52■■■□□ 2.32
PC-214ENST00000628663 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
PC-214ENST00000628663 ABCA5Q8WWZ7 1642 aa29.43■■■□□ 2.3
PC-214ENST00000628663 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
PC-214ENST00000628663 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
PC-214ENST00000628663 SNAPC4Q5SXM2 1469 aa29.41■■■□□ 2.3
PC-214ENST00000628663 CHD1O14646 1710 aa29.4■■■□□ 2.3
PC-214ENST00000628663 PBRM1Q86U86 1689 aa29.39■■■□□ 2.29
PC-214ENST00000628663 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
PC-214ENST00000628663 FBLN2P98095 1184 aa29.32■■■□□ 2.28
PC-214ENST00000628663 SYNJ2O15056 1496 aa29.25■■■□□ 2.27
PC-214ENST00000628663 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
PC-214ENST00000628663 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
PC-214ENST00000628663 ADAMTS12P58397 1594 aa29.14■■■□□ 2.26
PC-214ENST00000628663 CLASP1Q7Z460 1538 aa29.08■■■□□ 2.25
PC-214ENST00000628663 RIMBP3CA6NJZ7 1639 aa29.08■■■□□ 2.25
PC-214ENST00000628663 RIMBP3BA6NNM3 1639 aa29.08■■■□□ 2.25
PC-214ENST00000628663 RIMBP3Q9UFD9 1639 aa29.08■■■□□ 2.25
PC-214ENST00000628663 FHAD1B1AJZ9 1412 aa29.07■■■□□ 2.24
PC-214ENST00000628663 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
PC-214ENST00000628663 GRIN2AQ12879 1464 aa29.06■■■□□ 2.24
PC-214ENST00000628663 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
PC-214ENST00000628663 IGF1RP08069 1367 aa28.97■■■□□ 2.23
PC-214ENST00000628663 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
PC-214ENST00000628663 NUP160Q12769 1436 aa28.93■■■□□ 2.22
PC-214ENST00000628663 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
PC-214ENST00000628663 CUL7Q14999 1698 aa28.88■■■□□ 2.21
PC-214ENST00000628663 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
PC-214ENST00000628663 RUSC2Q8N2Y8 1516 aa28.81■■■□□ 2.2
PC-214ENST00000628663 CYB5RLQ6IPT4 315 aa28.78■■■□□ 2.2
PC-214ENST00000628663 CARMIL1Q5VZK9 1371 aa28.77■■■□□ 2.2
PC-214ENST00000628663 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
PC-214ENST00000628663 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms