RNA–Protein interactions for RNA: ENST00000348160.8

RBPJ-204, Transcript of recombination signal binding protein for immunoglobulin kappa J region, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBPJ, Length 1,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPJ-204ENST00000348160 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.9
RBPJ-204ENST00000348160 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
RBPJ-204ENST00000348160 ABCC9O60706 1549 aa33.67■■■□□ 2.98
RBPJ-204ENST00000348160 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
RBPJ-204ENST00000348160 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
RBPJ-204ENST00000348160 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
RBPJ-204ENST00000348160 NACADO15069 1562 aa32.47■■■□□ 2.79
RBPJ-204ENST00000348160 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
RBPJ-204ENST00000348160 MYO15BQ96JP2 1530 aa32.4■■■□□ 2.78
RBPJ-204ENST00000348160 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
RBPJ-204ENST00000348160 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
RBPJ-204ENST00000348160 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
RBPJ-204ENST00000348160 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
RBPJ-204ENST00000348160 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
RBPJ-204ENST00000348160 CECR2Q9BXF3 1484 aa30.72■■■□□ 2.51
RBPJ-204ENST00000348160 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
RBPJ-204ENST00000348160 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
RBPJ-204ENST00000348160 BAZ1AQ9NRL2 1556 aaPredicted RBP30.46■■■□□ 2.47
RBPJ-204ENST00000348160 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
RBPJ-204ENST00000348160 SMARCA4P51532 1647 aa30.41■■■□□ 2.46
RBPJ-204ENST00000348160 MROH2BQ7Z745 1585 aa30.4■■■□□ 2.46
RBPJ-204ENST00000348160 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
RBPJ-204ENST00000348160 SUPT5HO00267 1087 aaKnown RBP30.33■■■□□ 2.45
RBPJ-204ENST00000348160 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
RBPJ-204ENST00000348160 WIZO95785 1651 aa30.11■■■□□ 2.41
RBPJ-204ENST00000348160 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
RBPJ-204ENST00000348160 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
RBPJ-204ENST00000348160 NCAPD3P42695 1498 aa30.01■■■□□ 2.4
RBPJ-204ENST00000348160 BAZ1BQ9UIG0 1483 aaKnown RBP29.88■■■□□ 2.37
RBPJ-204ENST00000348160 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
RBPJ-204ENST00000348160 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
RBPJ-204ENST00000348160 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
RBPJ-204ENST00000348160 NESP48681 1621 aa29.32■■■□□ 2.28
RBPJ-204ENST00000348160 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
RBPJ-204ENST00000348160 CFTRP13569 1480 aa29.11■■■□□ 2.25
RBPJ-204ENST00000348160 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
RBPJ-204ENST00000348160 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
RBPJ-204ENST00000348160 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
RBPJ-204ENST00000348160 ERCC6Q03468 1493 aa28.87■■■□□ 2.21
RBPJ-204ENST00000348160 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
RBPJ-204ENST00000348160 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
RBPJ-204ENST00000348160 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
RBPJ-204ENST00000348160 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
RBPJ-204ENST00000348160 ABCC8Q09428 1581 aa28.68■■■□□ 2.18
RBPJ-204ENST00000348160 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
RBPJ-204ENST00000348160 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
RBPJ-204ENST00000348160 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
RBPJ-204ENST00000348160 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
RBPJ-204ENST00000348160 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
RBPJ-204ENST00000348160 WDR62O43379 1518 aa28.5■■■□□ 2.15
RBPJ-204ENST00000348160 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
RBPJ-204ENST00000348160 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
RBPJ-204ENST00000348160 CUX1P39880 1505 aa28.46■■■□□ 2.15
RBPJ-204ENST00000348160 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
RBPJ-204ENST00000348160 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
RBPJ-204ENST00000348160 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
RBPJ-204ENST00000348160 CUX2O14529 1486 aa28.32■■■□□ 2.12
RBPJ-204ENST00000348160 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.12
RBPJ-204ENST00000348160 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.12
RBPJ-204ENST00000348160 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
RBPJ-204ENST00000348160 SOGA1O94964 1423 aa28.16■■■□□ 2.1
RBPJ-204ENST00000348160 TARBP1Q13395 1621 aaKnown RBP28.12■■■□□ 2.09
RBPJ-204ENST00000348160 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
RBPJ-204ENST00000348160 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
RBPJ-204ENST00000348160 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
RBPJ-204ENST00000348160 FAM9AQ8IZU1 332 aaPredicted RBP28■■■□□ 2.07
RBPJ-204ENST00000348160 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.075e-10■■■□□ 18.2
RBPJ-204ENST00000348160 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
RBPJ-204ENST00000348160 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
RBPJ-204ENST00000348160 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
RBPJ-204ENST00000348160 EEA1Q15075 1411 aa27.95■■■□□ 2.07
RBPJ-204ENST00000348160 KIF27Q86VH2 1401 aa27.94■■■□□ 2.06
RBPJ-204ENST00000348160 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
RBPJ-204ENST00000348160 CSRNP3Q8WYN3 585 aa27.84■■■□□ 2.05
RBPJ-204ENST00000348160 ABCA5Q8WWZ7 1642 aa27.82■■■□□ 2.04
RBPJ-204ENST00000348160 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
RBPJ-204ENST00000348160 IGF1RP08069 1367 aa27.73■■■□□ 2.03
RBPJ-204ENST00000348160 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
RBPJ-204ENST00000348160 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
RBPJ-204ENST00000348160 SNAPC4Q5SXM2 1469 aa27.67■■■□□ 2.02
RBPJ-204ENST00000348160 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
RBPJ-204ENST00000348160 LOC105371045A0A1W2PR82 267 aa27.64■■■□□ 2.02
RBPJ-204ENST00000348160 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
RBPJ-204ENST00000348160 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
RBPJ-204ENST00000348160 KIF21BO75037 1637 aa27.58■■■□□ 2.01
RBPJ-204ENST00000348160 CARMIL1Q5VZK9 1371 aa27.58■■■□□ 2.01
RBPJ-204ENST00000348160 FBLN2P98095 1184 aa27.58■■■□□ 2
RBPJ-204ENST00000348160 MAGI1Q96QZ7 1491 aaPredicted RBP27.55■■■□□ 2
RBPJ-204ENST00000348160 CUL7Q14999 1698 aa27.54■■■□□ 2
RBPJ-204ENST00000348160 GOLGA3Q08378 1498 aa27.53■■■□□ 2
RBPJ-204ENST00000348160 RAPGEF2Q9Y4G8 1499 aa27.52■■■□□ 2
RBPJ-204ENST00000348160 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
RBPJ-204ENST00000348160 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
RBPJ-204ENST00000348160 CHD1O14646 1710 aa27.5■■□□□ 1.99
RBPJ-204ENST00000348160 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
RBPJ-204ENST00000348160 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
RBPJ-204ENST00000348160 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
RBPJ-204ENST00000348160 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
RBPJ-204ENST00000348160 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
RBPJ-204ENST00000348160 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms